Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AJNPOPFP_210 | 72208 | 72912 | WalR | 8.36e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| AJNPOPFP_145 | 7147 | 7341 | CspR | 4.51e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| AJNPOPFP_145 | 7147 | 7344 | CspA | 6.91e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AJNPOPFP_241 | 723 | 1658 | rep28 | 936 / 936 | 100.00 | CP005948 |
| AJNPOPFP_86 | 2134 | 3036 | rep38 | 903 / 903 | 99.45 | CP005943 |
| AJNPOPFP_180 | 1010 | 1902 | repUS73 | 908 / 1101 | 82.05 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AJNPOPFP_2 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_3 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_4 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_5 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_6 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_7 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_8 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_9 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_10 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_11 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_12 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_14 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_15 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_16 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_17 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_18 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_20 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_21 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_26 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_27 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_28 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_29 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_30 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_31 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_32 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_33 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_37 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_39 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_41 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_42 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_43 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_44 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_45 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_47 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_48 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_49 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_51 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_52 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_54 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_57 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_58 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_60 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_61 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_62 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_63 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_64 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_65 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_66 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_67 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_69 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_71 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_76 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_77 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_78 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_79 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_80 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_81 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_86 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_87 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_90 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_95 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_96 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_98 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_99 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_100 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_105 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_106 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_110 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_111 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_113 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_114 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_115 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_119 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_121 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_126 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_131 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_133 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_134 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_136 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_137 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_139 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_142 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_145 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_151 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_154 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_156 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_157 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_160 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_166 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_170 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_172 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_176 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_180 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_184 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_187 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_190 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_196 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_197 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_199 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_200 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_201 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_202 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_203 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_205 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_207 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_208 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_209 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_210 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_213 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_215 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_216 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_218 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_219 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_220 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_221 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_222 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_223 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_224 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_225 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_226 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_227 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_228 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_229 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_230 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_231 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_232 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_233 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_234 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_235 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_236 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_237 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_238 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_239 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_240 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_241 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_242 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_243 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_244 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_245 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_246 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_247 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_248 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_249 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_250 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_251 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_252 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_253 | 0.0 | 1.0 | 0.0 |
| AJNPOPFP_254 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_255 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_256 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_257 | 1.0 | 0.0 | 1.0 |
| AJNPOPFP_258 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AJNPOPFP_238 | 1401 | 22973 | False | Siphoviridae | VOG0703, VOG5008, VOG9531, VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544 |
Phigaro v2.4.0 (Database: Jan. 2024 release)