Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FLAJLENB_143 | 47413 | 46709 | WalR | 7.98e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FLAJLENB_210 | 87442 | 87248 | CspR | 6.33e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FLAJLENB_210 | 87442 | 87245 | CspA | 9.71e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FLAJLENB_99 | 6273 | 6901 | rep38 | 630 / 903 | 88.41 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FLAJLENB_1 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_2 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_3 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_4 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_6 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_7 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_9 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_10 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_13 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_14 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_15 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_16 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_17 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_18 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_19 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_20 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_22 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_23 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_24 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_25 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_26 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_28 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_29 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_30 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_31 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_32 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_33 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_34 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_35 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_36 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_38 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_39 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_40 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_41 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_42 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_48 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_49 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_51 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_52 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_53 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_55 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_56 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_60 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_62 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_65 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_66 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_69 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_70 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_72 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_73 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_74 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_75 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_76 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_81 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_82 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_85 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_86 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_87 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_88 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_89 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_91 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_95 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_96 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_99 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_105 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_106 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_107 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_109 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_114 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_116 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_118 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_124 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_125 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_135 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_139 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_143 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_147 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_152 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_156 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_158 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_162 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_166 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_170 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_173 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_174 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_175 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_176 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_177 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_178 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_179 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_180 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_181 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_183 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_184 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_186 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_187 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_188 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_189 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_190 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_191 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_192 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_193 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_194 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_195 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_196 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_197 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_198 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_199 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_200 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_201 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_203 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_204 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_205 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_207 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_208 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_209 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_210 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_211 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_212 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_213 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_214 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_215 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_216 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_217 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_218 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_219 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_222 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_223 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_224 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_225 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_226 | 0.0 | 1.0 | 0.0 |
| FLAJLENB_227 | 1.0 | 0.0 | 1.0 |
| FLAJLENB_230 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FLAJLENB_17 | 487 | 23730 | False | Siphoviridae | VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1353, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG0720 |
| FLAJLENB_26 | 2633 | 18900 | False | Siphoviridae | VOG4571, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG5852, VOG0660 |
| FLAJLENB_139 | 29380 | 37994 | False | Siphoviridae | VOG3000, VOG1563, VOG8222, VOG8925, VOG0321, VOG10904, VOG4548, VOG6394, VOG0322, VOG6545, VOG4632 |
| FLAJLENB_139 | 44436 | 64334 | False | Siphoviridae | VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG7168, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997 |
| FLAJLENB_143 | 49648 | 56419 | False | Siphoviridae | VOG4553, VOG4556, VOG4544, VOG4581, VOG4841 |
Phigaro v2.4.0 (Database: Jan. 2024 release)