Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DLOACEHB_163 | 47407 | 46703 | WalR | 7.98e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| DLOACEHB_96 | 87435 | 87241 | CspR | 4.16e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| DLOACEHB_96 | 87435 | 87238 | CspA | 6.38e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DLOACEHB_11 | 772 | 1839 | repUS73 | 1068 / 1101 | 96.07 | CP002654 |
| DLOACEHB_187 | 8 | 1042 | rep38 | 1044 / 1104 | 81.99 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DLOACEHB_4 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_6 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_8 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_10 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_11 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_12 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_13 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_14 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_18 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_19 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_20 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_24 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_27 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_29 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_31 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_37 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_40 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_44 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_45 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_46 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_50 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_51 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_52 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_53 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_54 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_55 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_56 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_57 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_58 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_59 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_60 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_61 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_62 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_63 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_64 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_65 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_66 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_67 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_68 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_69 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_70 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_71 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_72 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_73 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_74 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_75 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_76 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_77 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_78 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_80 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_81 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_82 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_83 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_84 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_85 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_86 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_88 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_89 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_90 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_92 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_93 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_94 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_95 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_96 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_97 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_100 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_102 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_108 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_111 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_113 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_114 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_118 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_119 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_120 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_121 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_126 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_129 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_130 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_131 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_132 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_134 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_135 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_136 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_137 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_138 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_139 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_140 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_141 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_143 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_144 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_145 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_146 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_148 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_149 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_151 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_152 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_153 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_154 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_155 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_156 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_158 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_160 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_161 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_162 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_163 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_164 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_165 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_166 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_167 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_168 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_169 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_170 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_171 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_178 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_179 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_180 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_181 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_186 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_187 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_189 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_192 | 0.0 | 1.0 | 0.0 |
| DLOACEHB_196 | 1.0 | 0.0 | 1.0 |
| DLOACEHB_198 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DLOACEHB_60 | 29296 | 37910 | False | Siphoviridae | VOG3000, VOG1563, VOG8222, VOG8925, VOG0321, VOG10904, VOG4548, VOG6394, VOG0322, VOG6545, VOG4632 |
| DLOACEHB_60 | 44352 | 64250 | False | Siphoviridae | VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG7168, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997 |
| DLOACEHB_126 | 2701 | 24145 | False | Siphoviridae | VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG9583, VOG0207, VOG4586, VOG5852, VOG0660, VOG5631, VOG4605, VOG4599, VOG10957, VOG8870 |
| DLOACEHB_146 | 481 | 23723 | False | Siphoviridae | VOG3498, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1353, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG0720 |
| DLOACEHB_163 | 49175 | 56711 | False | Siphoviridae | VOG0204, VOG4553, VOG4556, VOG1886, VOG4544, VOG4581, VOG4841, VOG0205 |
Phigaro v2.4.0 (Database: Jan. 2024 release)