Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FKKLLMNI_77 | 2521 | 3225 | WalR | 7.50e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FKKLLMNI_3 | 88608 | 88414 | CspR | 4.25e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FKKLLMNI_3 | 88608 | 88411 | CspA | 6.53e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FKKLLMNI_36 | 6548 | 7483 | rep28 | 936 / 936 | 100.00 | CP005948 |
| FKKLLMNI_30 | 380 | 1007 | rep38 | 630 / 903 | 88.57 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FKKLLMNI_1 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_2 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_3 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_4 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_5 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_6 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_7 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_8 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_9 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_10 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_11 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_12 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_13 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_14 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_15 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_16 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_17 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_18 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_19 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_20 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_21 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_22 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_23 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_24 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_25 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_26 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_27 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_28 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_29 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_30 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_31 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_32 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_33 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_34 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_35 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_36 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_37 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_38 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_39 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_40 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_41 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_42 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_43 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_44 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_45 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_46 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_48 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_49 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_50 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_51 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_52 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_53 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_54 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_55 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_57 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_58 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_59 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_60 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_61 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_62 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_63 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_64 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_65 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_66 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_67 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_68 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_69 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_70 | 1.0 | 0.0 | 1.0 |
| FKKLLMNI_77 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_88 | 0.0 | 1.0 | 0.0 |
| FKKLLMNI_93 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FKKLLMNI_15 | 14636 | 40705 | False | Siphoviridae | VOG0186, VOG4566, VOG4552, VOG4693, VOG0044, VOG0198, VOG0796, VOG0691, VOG0692, VOG9317, VOG4711, VOG0695, VOG0696, VOG0697, VOG6548, VOG9763, VOG0701, VOG6163, VOG0801, VOG4619, VOG4994 |
Phigaro v2.4.0 (Database: Jan. 2024 release)