Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 2 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JCAMACKK_20 | 953 | 2368 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 95.20 | 100.00 | WP_011681165 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JCAMACKK_187 | 42919 | 42215 | WalR | 5.63e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JCAMACKK_22 | 72668 | 72474 | CspR | 3.35e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JCAMACKK_22 | 72668 | 72471 | CspA | 5.13e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JCAMACKK_190 | 1322 | 2361 | rep38 | 1042 / 1104 | 89.54 | CP002655 |
| JCAMACKK_185 | 682 | 1644 | repUS73 | 979 / 1101 | 80.18 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JCAMACKK_1 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_2 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_3 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_4 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_5 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_6 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_7 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_8 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_9 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_10 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_11 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_12 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_13 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_14 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_15 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_16 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_17 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_18 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_19 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_20 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_21 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_22 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_23 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_24 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_25 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_26 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_27 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_28 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_29 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_30 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_31 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_33 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_34 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_35 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_36 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_37 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_38 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_39 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_40 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_41 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_42 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_43 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_44 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_45 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_46 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_47 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_48 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_49 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_50 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_51 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_52 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_54 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_55 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_56 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_57 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_58 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_59 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_61 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_62 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_63 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_65 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_66 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_67 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_68 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_69 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_70 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_71 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_72 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_73 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_74 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_75 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_76 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_77 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_78 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_80 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_81 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_82 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_83 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_84 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_85 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_86 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_88 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_99 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_110 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_111 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_122 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_133 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_135 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_136 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_137 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_138 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_139 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_140 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_141 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_142 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_143 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_144 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_145 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_146 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_147 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_148 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_149 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_150 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_151 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_152 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_153 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_154 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_155 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_156 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_157 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_158 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_159 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_160 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_161 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_162 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_163 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_164 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_165 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_166 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_167 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_168 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_169 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_170 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_171 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_172 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_173 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_174 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_175 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_176 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_177 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_178 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_179 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_180 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_181 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_182 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_183 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_184 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_185 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_186 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_187 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_188 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_189 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_190 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_191 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_192 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_193 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_194 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_195 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_196 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_197 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_198 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_199 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_200 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_201 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_202 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_203 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_204 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_205 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_206 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_207 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_208 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_209 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_210 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_211 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_212 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_213 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_214 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_215 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_216 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_217 | 1.0 | 0.0 | 1.0 |
| JCAMACKK_218 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_219 | 0.0 | 1.0 | 0.0 |
| JCAMACKK_220 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JCAMACKK_44 | 49730 | 57293 | False | Siphoviridae | VOG4552, VOG3711, VOG3459, VOG0181, VOG5073, VOG0535, VOG0322, VOG6545, VOG0514, VOG4566, VOG0189 |
| JCAMACKK_198 | 68773 | 80729 | False | Siphoviridae | VOG4632, VOG4609, VOG6414, VOG0205, VOG4841, VOG4581, VOG4544, VOG2935, VOG4556, VOG4568, VOG0204, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)