Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GPKMGGPE_117 | 29657 | 31237 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GPKMGGPE_1 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_2 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_3 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_4 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_5 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_6 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_7 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_8 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_9 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_10 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_11 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_13 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_14 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_15 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_16 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_17 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_18 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_19 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_20 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_21 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_22 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_23 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_24 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_25 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_26 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_27 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_28 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_29 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_30 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_31 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_32 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_33 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_34 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_35 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_36 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_37 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_38 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_39 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_40 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_41 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_42 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_43 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_44 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_45 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_46 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_47 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_48 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_49 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_50 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_51 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_52 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_53 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_54 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_55 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_56 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_57 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_58 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_59 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_60 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_61 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_62 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_63 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_64 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_65 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_66 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_67 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_68 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_69 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_70 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_71 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_72 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_73 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_74 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_75 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_76 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_77 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_78 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_79 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_80 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_81 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_82 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_83 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_84 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_85 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_86 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_87 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_88 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_89 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_90 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_91 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_92 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_93 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_94 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_95 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_96 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_97 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_98 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_99 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_100 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_101 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_102 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_103 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_104 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_105 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_106 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_107 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_108 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_109 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_110 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_111 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_112 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_113 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_114 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_115 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_116 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_117 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_118 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_119 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_120 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_121 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_122 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_123 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_124 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_125 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_126 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_127 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_128 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_129 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_130 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_131 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_132 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_133 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_134 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_135 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_136 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_137 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_138 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_139 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_140 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_141 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_142 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_143 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_144 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_145 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_146 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_147 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_148 | 0.0 | 1.0 | 0.0 |
| GPKMGGPE_149 | 1.0 | 0.0 | 1.0 |
| GPKMGGPE_150 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)