Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DAPKPGII_173 | 97957 | 98658 | WalR | 1.46e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DAPKPGII_1 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_2 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_3 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_4 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_5 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_6 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_7 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_8 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_9 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_10 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_11 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_12 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_13 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_14 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_15 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_16 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_17 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_18 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_19 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_20 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_21 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_22 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_23 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_24 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_25 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_26 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_27 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_28 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_29 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_30 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_31 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_32 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_33 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_34 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_35 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_36 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_37 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_38 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_39 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_41 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_42 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_43 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_44 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_46 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_47 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_48 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_49 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_50 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_51 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_52 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_53 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_54 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_55 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_56 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_57 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_58 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_59 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_60 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_61 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_62 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_63 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_64 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_65 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_66 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_67 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_68 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_69 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_70 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_71 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_72 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_73 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_74 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_75 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_76 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_77 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_78 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_79 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_80 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_81 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_82 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_83 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_84 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_85 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_86 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_87 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_88 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_96 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_102 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_103 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_106 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_112 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_116 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_122 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_126 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_130 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_134 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_138 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_142 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_147 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_148 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_154 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_156 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_161 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_164 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_165 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_168 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_170 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_171 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_172 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_173 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_174 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_175 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_176 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_177 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_178 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_179 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_180 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_181 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_182 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_183 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_184 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_185 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_186 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_187 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_188 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_189 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_190 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_191 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_192 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_193 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_194 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_195 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_196 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_197 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_198 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_199 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_200 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_201 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_202 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_203 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_204 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_205 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_206 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_207 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_208 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_209 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_210 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_211 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_212 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_213 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_214 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_215 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_216 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_217 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_218 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_219 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_220 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_221 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_222 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_223 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_224 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_225 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_226 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_227 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_228 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_229 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_230 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_231 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_232 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_233 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_234 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_235 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_236 | 1.0 | 0.0 | 1.0 |
| DAPKPGII_237 | 0.0 | 1.0 | 0.0 |
| DAPKPGII_238 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DAPKPGII_57 | 6574 | 45456 | False | Myoviridae | VOG8520, VOG1656, VOG4552, VOG5735, VOG0650, VOG6495, VOG0685, VOG0322, VOG0226, VOG10904, VOG4799, VOG0025, VOG0514, VOG7685, VOG7484, VOG0822, VOG5545, VOG0536, VOG1298, VOG4010, VOG0198, VOG1154, VOG0796, VOG0275, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG4910, VOG1956, VOG1433, VOG1348 |
| DAPKPGII_195 | 58493 | 96793 | False | Myoviridae | VOG3298, VOG3298, VOG0565, VOG4894, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG5068, VOG6131, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG2779, VOG1915, VOG4865, VOG4564, VOG1912, VOG10227, VOG0796, VOG0198, VOG4010, VOG0044, VOG6005, VOG4693, VOG7236, VOG0186, VOG1309, VOG9706, VOG2085, VOG0655, VOG1638 |
| DAPKPGII_206 | 74578 | 88235 | False | Siphoviridae | VOG8990, VOG0480, VOG8908, VOG0198, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205 |
Phigaro v2.4.0 (Database: Jan. 2024 release)