Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EKBHCOCM_3 | 52930 | 53820 | CblA-1 | ARO:3002999 | CblA-1 | 98.99 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EKBHCOCM_3 | 52930 | 53817 | cblA | CblA family class A beta-lactamase | BLASTX | 98.99 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EKBHCOCM_1 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_2 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_3 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_4 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_5 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_6 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_7 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_8 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_9 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_10 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_11 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_12 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_13 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_14 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_15 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_16 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_17 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_18 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_19 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_20 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_21 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_22 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_23 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_24 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_25 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_26 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_27 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_28 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_29 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_30 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_31 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_32 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_33 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_34 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_35 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_36 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_38 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_39 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_40 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_41 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_42 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_43 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_44 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_45 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_46 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_48 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_49 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_50 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_51 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_52 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_53 | 1.0 | 0.0 | 1.0 |
| EKBHCOCM_55 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_58 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_59 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_60 | 0.0 | 1.0 | 0.0 |
| EKBHCOCM_61 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EKBHCOCM_1 | 4459 | 11129 | False | Unknown | VOG0189, |
| EKBHCOCM_22 | 143652 | 154490 | False | Unknown | VOG3992, |
| EKBHCOCM_61 | 81588 | 86870 | False | Myoviridae | VOG11032, |
Phigaro v2.4.0 (Database: Jan. 2024 release)