Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HCHNAGOL_13 | 114327 | 113623 | WalR | 1.45e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| HCHNAGOL_9 | 13823 | 14020 | CspR | 1.55e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HCHNAGOL_1 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_2 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_3 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_4 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_5 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_6 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_7 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_8 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_9 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_10 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_11 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_12 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_13 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_14 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_15 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_16 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_17 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_18 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_19 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_20 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_21 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_22 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_23 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_24 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_25 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_26 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_27 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_29 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_30 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_31 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_32 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_33 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_34 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_35 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_37 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_38 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_39 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_40 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_41 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_42 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_43 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_44 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_45 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_46 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_47 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_48 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_49 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_50 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_51 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_52 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_53 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_54 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_55 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_56 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_58 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_59 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_60 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_61 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_62 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_63 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_64 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_65 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_66 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_68 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_69 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_70 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_71 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_72 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_73 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_74 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_75 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_76 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_77 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_78 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_79 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_81 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_83 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_84 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_85 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_86 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_87 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_88 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_89 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_90 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_92 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_93 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_94 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_95 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_97 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_98 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_99 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_101 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_102 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_104 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_106 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_107 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_110 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_111 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_113 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_114 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_116 | 1.0 | 0.0 | 1.0 |
| HCHNAGOL_117 | 0.0 | 1.0 | 0.0 |
| HCHNAGOL_118 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)