Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 1 | 0 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AOAIJLBN_11 | 147739 | 149664 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| AOAIJLBN_25 | 60376 | 61044 | ErmG | ARO:3000522 | ErmG | 99.55 | 90.98 | L42817.1 |
| AOAIJLBN_28 | 21033 | 21935 | CepA-29 | ARO:3006224 | CepA-29 | 99.67 | 100.00 | NG_050385.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AOAIJLBN_28 | 21033 | 21935 | cepA-29 | Unknown Beta-lactam | 99.78 | 100.00 | U05884 |
| AOAIJLBN_25 | 60376 | 61096 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.72 | 98.10 | M15332 |
| AOAIJLBN_11 | 147739 | 149664 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AOAIJLBN_28 | 21033 | 21932 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_063865204.1 |
| AOAIJLBN_25 | 60379 | 61110 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | INTERNAL_STOP | 98.36 | 100.00 | WP_014387027.1 |
| AOAIJLBN_11 | 147739 | 149661 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AOAIJLBN_67 | 1590 | 2783 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| AOAIJLBN_67 | 1590 | 2783 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| AOAIJLBN_67 | 1590 | 2783 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| AOAIJLBN_78 | 373 | 1052 | repUS2 | 682 / 681 | 98.39 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AOAIJLBN_1 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_2 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_3 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_4 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_5 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_6 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_7 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_8 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_9 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_10 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_11 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_12 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_13 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_14 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_15 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_16 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_17 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_18 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_19 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_20 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_21 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_22 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_23 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_24 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_25 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_26 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_27 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_28 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_29 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_30 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_31 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_32 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_33 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_34 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_35 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_36 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_37 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_38 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_39 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_40 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_41 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_42 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_43 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_44 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_45 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_46 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_47 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_48 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_49 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_50 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_51 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_52 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_53 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_54 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_55 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_56 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_57 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_58 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_59 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_60 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_61 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_62 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_63 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_64 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_65 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_66 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_67 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_68 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_69 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_70 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_71 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_72 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_73 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_74 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_75 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_76 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_77 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_78 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_79 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_80 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_81 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_82 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_83 | 0.0 | 1.0 | 0.0 |
| AOAIJLBN_84 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_86 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_87 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_88 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_89 | 1.0 | 0.0 | 1.0 |
| AOAIJLBN_90 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AOAIJLBN_35 | 2588 | 13162 | False | Siphoviridae | VOG0749, |
| AOAIJLBN_36 | 24489 | 32674 | False | Unknown | VOG4573, |
| AOAIJLBN_43 | 21357 | 25272 | False | Myoviridae | VOG0139, |
| AOAIJLBN_51 | 8206 | 19055 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)