Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FPKOFMHD_1 | 133208 | 135182 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
| FPKOFMHD_28 | 20743 | 21645 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FPKOFMHD_1 | 133256 | 135181 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
| FPKOFMHD_28 | 20743 | 21645 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | U05887 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FPKOFMHD_1 | 133256 | 135178 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
| FPKOFMHD_28 | 20743 | 21642 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FPKOFMHD_63 | 2005 | 2677 | repUS2 | 675 / 681 | 92.30 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FPKOFMHD_1 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_2 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_3 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_4 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_5 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_6 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_7 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_8 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_9 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_10 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_11 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_12 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_13 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_14 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_15 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_16 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_17 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_18 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_19 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_20 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_21 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_22 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_23 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_24 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_25 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_26 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_27 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_28 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_29 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_30 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_31 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_32 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_33 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_34 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_35 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_36 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_37 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_38 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_39 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_40 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_41 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_42 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_43 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_44 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_45 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_46 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_47 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_48 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_49 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_50 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_51 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_52 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_53 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_54 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_55 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_56 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_57 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_58 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_59 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_60 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_61 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_62 | 0.0 | 1.0 | 0.0 |
| FPKOFMHD_63 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_64 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_65 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_67 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_68 | 1.0 | 0.0 | 1.0 |
| FPKOFMHD_69 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)