safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
7	0	0	7.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
AJKPPCBD_1	580796	582721	tet(Q)	ARO:3000191	tet(Q)	97.04	97.56	Z21523.1
AJKPPCBD_3	491324	492529	Mef(En2)	ARO:3004659	Mef(En2)	99.50	100.00	AF251288.1
AJKPPCBD_3	469394	470296	cepA	ARO:3003559	cepA	99.67	100.00	U05883.1
AJKPPCBD_3	404084	406058	tet(Q)	ARO:3000191	tet(Q)	100.00	97.56	Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
AJKPPCBD_1	580796	582721	tet(Q)	Doxycycline, Tetracycline, Minocycline	100.00	100.00	X58717
AJKPPCBD_3	469394	470296	cepA-49	Unknown Beta-lactam	99.89	100.00	U05886
AJKPPCBD_14	3126	3880	cfxA6	Unknown Beta-lactam	87.43	75.70	GQ342996

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
AJKPPCBD_3	492554	493063	lnu(AN2)	lincosamide nucleotidyltransferase Lnu(AN2)	EXACTX	100.00	100.00	WP_004308783.1
AJKPPCBD_1	580796	582718	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	EXACTX	100.00	100.00	WP_004293868.1
AJKPPCBD_3	404132	406054	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	EXACTX	100.00	100.00	WP_002560998.1
AJKPPCBD_3	469397	470296	cepA	CepA family extended-spectrum class A beta-lactamase	BLASTX	99.67	100.00	WP_005795628.1
AJKPPCBD_3	491324	492526	mef(En2)	macrolide efflux MFS transporter Mef(En2)	BLASTX	99.50	100.00	WP_063853729.1
AJKPPCBD_14	3077	4021	cfxA6	broad-spectrum class A beta-lactamase CfxA6	BLASTX	80.32	98.44	WP_117664257.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
AJKPPCBD_1	0.0	1.0	0.0
AJKPPCBD_2	0.0	1.0	0.0
AJKPPCBD_3	0.0	1.0	0.0
AJKPPCBD_4	0.0	1.0	0.0
AJKPPCBD_5	0.0	1.0	0.0
AJKPPCBD_6	0.0	1.0	0.0
AJKPPCBD_7	0.0	1.0	0.0
AJKPPCBD_8	0.0	1.0	0.0
AJKPPCBD_9	0.0	1.0	0.0
AJKPPCBD_10	1.0	0.0	1.0
AJKPPCBD_11	1.0	0.0	1.0
AJKPPCBD_12	0.0	1.0	0.0
AJKPPCBD_13	0.0	1.0	0.0
AJKPPCBD_14	1.0	0.0	1.0
AJKPPCBD_15	1.0	0.0	1.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
No hit found

Phigaro v2.4.0 (Database: Jan. 2024 release)