Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IDDOGNGF_169 | 66997 | 67701 | WalR | 6.86e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| IDDOGNGF_191 | 73040 | 72843 | CspR | 3.04e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IDDOGNGF_8 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_16 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_19 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_23 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_26 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_32 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_43 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_54 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_65 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_76 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_77 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_87 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_98 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_106 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_107 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_108 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_109 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_110 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_111 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_112 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_113 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_114 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_115 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_116 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_117 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_118 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_119 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_120 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_121 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_122 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_123 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_124 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_125 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_126 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_127 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_128 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_129 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_130 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_131 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_132 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_133 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_134 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_135 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_136 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_137 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_138 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_139 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_140 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_141 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_142 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_143 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_144 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_145 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_146 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_147 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_148 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_149 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_150 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_151 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_152 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_153 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_154 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_155 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_156 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_157 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_158 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_159 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_160 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_161 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_162 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_163 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_164 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_165 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_166 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_167 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_168 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_169 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_170 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_171 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_172 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_173 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_175 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_177 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_178 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_180 | 0.0 | 1.0 | 0.0 |
| IDDOGNGF_181 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_182 | 1.0 | 0.0 | 1.0 |
| IDDOGNGF_191 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IDDOGNGF_114 | 44008 | 79007 | False | Siphoviridae | VOG3801, VOG7373, VOG1246, VOG6083, VOG8155, VOG4649, VOG0054, VOG1637, VOG7896, VOG6455, VOG4599, VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG0694, VOG4555, VOG1300, VOG4564, VOG0720, VOG10227, VOG0796 |
| IDDOGNGF_114 | 84670 | 90805 | False | Unknown | VOG0189, VOG4855, VOG0186, VOG1309, VOG2338, VOG6495 |
Phigaro v2.4.0 (Database: Jan. 2024 release)