Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 3 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OCFEEFFP_237 | 27074 | 26370 | WalR | 6.86e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| OCFEEFFP_64 | 452 | 198 | spr1327 | 5.22e-51 | essential gene | 92.94 | 100.00 | AAL00131 |
| OCFEEFFP_258 | 6003 | 6200 | CspR | 3.04e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OCFEEFFP_217 | 5006 | 5565 | rep38 | 561 / 903 | 90.02 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OCFEEFFP_1 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_11 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_18 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_22 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_27 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_33 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_40 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_46 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_50 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_56 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_58 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_59 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_63 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_65 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_71 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_74 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_78 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_82 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_85 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_94 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_105 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_116 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_117 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_128 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_139 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_150 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_161 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_172 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_183 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_189 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_190 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_191 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_192 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_193 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_194 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_195 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_196 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_197 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_198 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_199 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_200 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_201 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_202 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_203 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_204 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_205 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_206 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_207 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_208 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_209 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_210 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_211 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_212 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_213 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_214 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_215 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_216 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_217 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_218 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_219 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_220 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_221 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_222 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_223 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_224 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_225 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_226 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_227 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_228 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_229 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_230 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_231 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_232 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_233 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_234 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_235 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_236 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_237 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_239 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_240 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_241 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_242 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_243 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_244 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_245 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_246 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_247 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_248 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_249 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_250 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_251 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_252 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_253 | 0.0 | 1.0 | 0.0 |
| OCFEEFFP_255 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_256 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_257 | 1.0 | 0.0 | 1.0 |
| OCFEEFFP_258 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OCFEEFFP_117 | 58223 | 64358 | False | Unknown | VOG9667, VOG6495, VOG2338, VOG1309, VOG0186, VOG4855, VOG0189 |
| OCFEEFFP_117 | 70021 | 105020 | False | Siphoviridae | VOG4570, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG0694, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4649, VOG8155, VOG6083, VOG1246, VOG7373 |
Phigaro v2.4.0 (Database: Jan. 2024 release)