Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GLDIGDOG_166 | 47783 | 47079 | WalR | 7.42e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| GLDIGDOG_35 | 14964 | 14767 | CspR | 4.09e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GLDIGDOG_1 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_4 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_6 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_8 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_9 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_10 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_11 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_13 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_15 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_16 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_17 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_18 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_20 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_21 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_22 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_24 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_25 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_28 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_29 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_30 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_33 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_34 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_35 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_37 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_39 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_41 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_42 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_45 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_46 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_47 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_49 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_50 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_51 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_52 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_53 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_56 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_61 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_72 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_82 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_92 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_102 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_109 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_117 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_118 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_123 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_125 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_126 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_127 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_128 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_129 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_130 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_131 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_132 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_133 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_134 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_135 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_136 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_137 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_138 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_139 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_140 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_141 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_142 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_143 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_144 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_145 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_146 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_147 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_148 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_149 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_151 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_152 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_153 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_154 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_155 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_157 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_158 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_160 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_161 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_163 | 1.0 | 0.0 | 1.0 |
| GLDIGDOG_164 | 0.0 | 1.0 | 0.0 |
| GLDIGDOG_166 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GLDIGDOG_10 | 2359 | 7227 | False | Unknown | VOG4693, VOG6623, VOG4688, VOG0189, VOG4566, VOG0186, VOG1309 |
| GLDIGDOG_11 | 73574 | 75332 | False | Unknown | VOG8294 |
| GLDIGDOG_13 | 1083 | 26319 | False | Siphoviridae | VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG0861, VOG7017, VOG0703, VOG4918, VOG0866, VOG1724 |
| GLDIGDOG_18 | 41942 | 52991 | False | Siphoviridae | VOG0226, VOG4841, VOG0195, VOG4581, VOG1886, VOG0202, VOG4556, VOG4568, VOG0205, VOG0207, VOG4586 |
| GLDIGDOG_51 | 55396 | 61944 | False | Siphoviridae | VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205 |
Phigaro v2.4.0 (Database: Jan. 2024 release)