Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| INMMAKCP_38 | 4 | 468 | speG | 0.0 | Spes | Exotoxin | 95.91 | 65.96 | WP_010921857 |
| INMMAKCP_38 | 4 | 460 | SDEG_RS09700 | 1.35e-129 | Spes | Exotoxin | 84.93 | 64.68 | WP_012767583 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| INMMAKCP_254 | 66997 | 67701 | WalR | 6.86e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| INMMAKCP_143 | 91535 | 91338 | CspR | 3.75e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| INMMAKCP_126 | 1212 | 1771 | rep38 | 561 / 903 | 90.02 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| INMMAKCP_1 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_2 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_3 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_4 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_8 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_13 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_17 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_22 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_26 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_29 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_32 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_35 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_36 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_37 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_39 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_41 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_43 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_44 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_46 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_48 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_51 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_52 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_53 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_54 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_55 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_57 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_60 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_61 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_64 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_67 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_68 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_71 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_73 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_75 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_77 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_78 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_80 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_82 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_85 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_88 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_89 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_90 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_92 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_93 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_96 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_98 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_99 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_101 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_102 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_107 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_109 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_110 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_114 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_117 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_119 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_121 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_123 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_124 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_126 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_127 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_129 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_131 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_133 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_134 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_137 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_138 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_141 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_142 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_143 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_150 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_161 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_172 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_194 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_205 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_216 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_227 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_237 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_242 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_243 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_244 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_245 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_246 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_247 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_248 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_249 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_250 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_251 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_252 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_253 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_254 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_255 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_256 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_257 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_258 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_259 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_261 | 1.0 | 0.0 | 1.0 |
| INMMAKCP_262 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_263 | 0.0 | 1.0 | 0.0 |
| INMMAKCP_265 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| INMMAKCP_55 | 57857 | 63992 | False | Unknown | VOG9667, VOG6495, VOG2338, VOG1309, VOG0186, VOG4855, VOG0189 |
| INMMAKCP_55 | 69655 | 104654 | False | Siphoviridae | VOG4570, VOG0796, VOG10227, VOG0720, VOG4564, VOG1300, VOG4555, VOG0694, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4649, VOG8155, VOG6083, VOG1246, VOG7373 |
Phigaro v2.4.0 (Database: Jan. 2024 release)