Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FEECAKOL_176 | 54042 | 54746 | WalR | 7.42e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FEECAKOL_46 | 14964 | 14767 | CspR | 4.09e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FEECAKOL_5 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_8 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_9 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_11 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_15 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_17 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_19 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_20 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_24 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_25 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_26 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_28 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_31 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_33 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_35 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_38 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_39 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_40 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_42 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_44 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_46 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_47 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_48 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_49 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_51 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_52 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_53 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_63 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_74 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_85 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_96 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_107 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_108 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_118 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_121 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_122 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_123 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_124 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_125 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_126 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_127 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_128 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_129 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_130 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_131 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_132 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_133 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_134 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_135 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_136 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_137 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_138 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_139 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_140 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_141 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_142 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_143 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_144 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_145 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_146 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_147 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_148 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_149 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_150 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_151 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_152 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_153 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_155 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_156 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_159 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_160 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_161 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_162 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_163 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_164 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_165 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_166 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_168 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_170 | 1.0 | 0.0 | 1.0 |
| FEECAKOL_171 | 0.0 | 1.0 | 0.0 |
| FEECAKOL_176 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FEECAKOL_15 | 2359 | 7227 | False | Unknown | VOG4693, VOG6623, VOG4688, VOG0189, VOG4566, VOG0186, VOG1309 |
| FEECAKOL_17 | 4682 | 6440 | False | Unknown | VOG0703, VOG8294 |
| FEECAKOL_19 | 1083 | 25721 | False | Siphoviridae | VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG0861, VOG7017, VOG0703, VOG4918, VOG0866 |
| FEECAKOL_28 | 4857 | 15906 | False | Siphoviridae | VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0195, VOG4841 |
| FEECAKOL_108 | 125540 | 132088 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556 |
Phigaro v2.4.0 (Database: Jan. 2024 release)