Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GANOOLJH_154 | 47783 | 47079 | WalR | 7.42e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| GANOOLJH_35 | 14964 | 14767 | CspR | 4.09e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GANOOLJH_2 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_3 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_5 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_8 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_11 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_12 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_13 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_14 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_15 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_19 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_20 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_21 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_24 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_26 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_27 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_28 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_30 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_32 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_33 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_34 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_35 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_36 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_39 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_40 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_44 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_55 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_66 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_77 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_86 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_96 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_98 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_99 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_100 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_101 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_102 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_103 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_104 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_105 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_106 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_107 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_108 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_109 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_110 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_111 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_112 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_113 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_114 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_115 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_116 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_117 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_118 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_119 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_120 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_121 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_122 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_123 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_124 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_125 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_126 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_127 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_128 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_129 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_130 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_131 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_133 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_134 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_135 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_136 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_137 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_138 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_139 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_140 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_141 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_143 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_144 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_146 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_147 | 1.0 | 0.0 | 1.0 |
| GANOOLJH_150 | 0.0 | 1.0 | 0.0 |
| GANOOLJH_154 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GANOOLJH_11 | 76181 | 81049 | False | Unknown | VOG1309, VOG0186, VOG4566, VOG0189, VOG4688, VOG6623 |
| GANOOLJH_13 | 4682 | 6440 | False | Unknown | VOG0703, VOG8294 |
| GANOOLJH_14 | 1083 | 26319 | False | Siphoviridae | VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG0861, VOG7017, VOG0703, VOG4918, VOG0866, VOG1724 |
| GANOOLJH_21 | 41942 | 52991 | False | Siphoviridae | VOG0226, VOG4841, VOG0195, VOG4581, VOG1886, VOG0202, VOG4556, VOG4568, VOG0205, VOG0207, VOG4586 |
| GANOOLJH_100 | 125540 | 132088 | False | Siphoviridae | VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556 |
Phigaro v2.4.0 (Database: Jan. 2024 release)