Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMPJIBMD_1 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_2 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_3 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_4 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_5 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_6 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_7 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_8 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_10 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_11 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_12 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_13 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_15 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_16 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_17 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_18 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_19 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_20 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_21 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_22 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_23 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_24 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_25 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_26 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_27 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_28 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_29 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_33 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_34 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_35 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_36 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_38 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_39 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_40 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_41 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_43 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_44 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_45 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_46 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_47 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_48 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_49 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_51 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_52 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_53 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_54 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_55 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_57 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_58 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_59 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_60 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_61 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_63 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_64 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_65 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_67 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_68 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_69 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_70 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_71 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_72 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_73 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_74 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_76 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_77 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_78 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_79 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_80 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_82 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_83 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_84 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_86 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_87 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_89 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_90 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_92 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_94 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_95 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_96 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_97 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_98 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_99 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_101 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_102 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_103 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_104 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_105 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_106 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_108 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_110 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_111 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_112 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_114 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_115 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_116 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_118 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_120 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_121 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_122 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_124 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_126 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_127 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_128 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_129 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_130 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_132 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_133 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_134 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_137 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_138 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_139 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_141 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_142 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_144 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_145 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_146 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_148 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_149 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_150 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_151 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_152 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_153 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_154 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_156 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_158 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_159 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_160 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_162 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_163 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_165 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_166 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_168 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_169 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_171 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_172 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_173 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_174 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_175 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_176 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_178 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_180 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_181 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_182 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_183 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_184 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_185 | 1.0 | 0.0 | 1.0 |
| FMPJIBMD_186 | 0.0 | 1.0 | 0.0 |
| FMPJIBMD_187 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FMPJIBMD_39 | 3176 | 28052 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| FMPJIBMD_61 | 3954 | 29895 | False | Siphoviridae | VOG4856, VOG4645, VOG4659, VOG4633, VOG4760, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG4555, VOG0686, VOG0692, VOG0691, VOG4544, VOG5532, VOG4618 |
| FMPJIBMD_61 | 35870 | 39608 | False | Siphoviridae | VOG0906, VOG0234, VOG2703, VOG4552, VOG4603 |
| FMPJIBMD_69 | 3617 | 7343 | False | Siphoviridae | VOG8520, VOG8520, VOG0862, VOG1638, VOG0787 |
| FMPJIBMD_78 | 16588 | 27783 | False | Myoviridae / Siphoviridae | VOG4705, VOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520 |
| FMPJIBMD_92 | 6791 | 19846 | False | Siphoviridae | VOG4659, VOG4633, VOG4545, VOG0209 |
| FMPJIBMD_146 | 8128 | 22122 | False | Myoviridae | VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG5027, VOG1912, VOG7407, VOG1837, VOG4618, VOG0638, VOG8269, VOG0198 |
| FMPJIBMD_146 | 32272 | 39948 | False | Siphoviridae | VOG9667, VOG10735, VOG4995, VOG0010, VOG9667, VOG4602, VOG1561, VOG0275, VOG8561 |
| FMPJIBMD_160 | 1841 | 27617 | False | Siphoviridae | VOG0327, VOG3519, VOG6005, VOG0198, VOG4841, VOG4581, VOG2545, VOG0376, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355, VOG1594 |
| FMPJIBMD_174 | 32566 | 45814 | False | Myoviridae | VOG0198, VOG0686, VOG0796, VOG7407, VOG1912, VOG5027, VOG4865, VOG1915, VOG6932, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352 |
| FMPJIBMD_187 | 22702 | 47731 | False | Siphoviridae | VOG0861, VOG4705, VOG0566, VOG1594, VOG8355, VOG4659, VOG4633, VOG4545, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG10115, VOG4581, VOG4841, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)