Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CLDPALIF_2 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_3 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_5 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_6 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_10 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_11 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_12 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_13 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_14 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_16 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_18 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_19 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_20 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_22 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_23 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_24 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_26 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_27 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_28 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_29 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_30 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_32 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_33 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_35 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_36 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_37 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_38 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_39 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_40 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_42 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_43 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_46 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_47 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_48 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_49 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_50 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_52 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_54 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_55 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_56 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_57 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_59 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_63 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_64 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_65 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_66 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_67 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_68 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_69 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_70 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_71 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_72 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_73 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_74 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_75 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_76 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_77 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_78 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_82 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_83 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_85 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_86 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_87 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_88 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_89 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_91 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_92 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_94 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_96 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_97 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_98 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_101 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_102 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_103 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_105 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_111 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_112 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_113 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_114 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_115 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_117 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_118 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_119 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_120 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_122 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_125 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_126 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_127 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_129 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_130 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_132 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_133 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_134 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_135 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_136 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_137 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_138 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_139 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_140 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_141 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_142 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_143 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_144 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_145 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_146 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_147 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_148 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_149 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_150 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_151 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_152 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_153 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_154 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_155 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_156 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_157 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_158 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_159 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_160 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_161 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_162 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_163 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_164 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_165 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_167 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_168 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_169 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_170 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_171 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_172 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_173 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_174 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_175 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_176 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_177 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_178 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_179 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_180 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_181 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_182 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_183 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_184 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_185 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_186 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_187 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_188 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_189 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_190 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_191 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_192 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_193 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_194 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_195 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_196 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_197 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_199 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_200 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_201 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_202 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_203 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_204 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_205 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_206 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_207 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_209 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_210 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_211 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_212 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_214 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_218 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_219 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_220 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_221 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_222 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_224 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_225 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_226 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_227 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_228 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_229 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_230 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_231 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_232 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_233 | 1.0 | 0.0 | 1.0 |
| CLDPALIF_235 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_237 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_239 | 0.0 | 1.0 | 0.0 |
| CLDPALIF_240 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CLDPALIF_126 | 45460 | 73808 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG5334, VOG2170, VOG9945, VOG4705 |
Phigaro v2.4.0 (Database: Jan. 2024 release)