Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KHMIDJOF_65 | 4301 | 5023 | rep6 | 723 / 723 | 100.00 | AJ223161 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KHMIDJOF_2 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_3 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_4 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_5 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_6 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_8 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_9 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_11 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_12 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_13 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_14 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_15 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_16 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_17 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_18 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_19 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_20 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_21 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_22 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_23 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_24 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_25 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_26 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_28 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_29 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_30 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_31 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_32 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_33 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_34 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_37 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_38 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_39 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_41 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_42 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_43 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_44 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_45 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_47 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_49 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_50 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_51 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_52 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_53 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_55 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_56 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_57 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_58 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_60 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_61 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_62 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_63 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_64 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_65 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_66 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_67 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_70 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_72 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_73 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_74 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_75 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_76 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_77 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_78 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_79 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_81 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_82 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_83 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_84 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_85 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_86 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_87 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_89 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_90 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_91 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_92 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_94 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_95 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_96 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_97 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_98 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_99 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_100 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_101 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_102 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_104 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_105 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_107 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_108 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_109 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_110 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_111 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_112 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_114 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_115 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_116 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_117 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_118 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_119 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_120 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_121 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_122 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_123 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_125 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_126 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_127 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_128 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_129 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_130 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_131 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_132 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_133 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_135 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_136 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_137 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_138 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_139 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_140 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_141 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_142 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_143 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_144 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_145 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_146 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_147 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_148 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_149 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_150 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_154 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_155 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_156 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_157 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_158 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_161 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_162 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_165 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_168 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_169 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_170 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_172 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_173 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_175 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_176 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_177 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_180 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_182 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_184 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_186 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_187 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_189 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_190 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_191 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_192 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_193 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_194 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_197 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_199 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_200 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_201 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_204 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_205 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_206 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_208 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_209 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_212 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_213 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_214 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_215 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_218 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_219 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_220 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_221 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_222 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_224 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_225 | 1.0 | 0.0 | 1.0 |
| KHMIDJOF_226 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_227 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_228 | 0.0 | 1.0 | 0.0 |
| KHMIDJOF_229 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KHMIDJOF_176 | 4784 | 32540 | False | Myoviridae | VOG0638, VOG5318, VOG4618, VOG1154, VOG7407, VOG1912, VOG5027, VOG1915, VOG1942, VOG4710, VOG1353, VOG1883, VOG1352, VOG4699, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4620, VOG0173, VOG5913, VOG4397, VOG9945, VOG4705 |
| KHMIDJOF_176 | 62794 | 81674 | False | Siphoviridae | VOG4705, VOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520, VOG4552, VOG2228, VOG9708, VOG4611, VOG0322, VOG4548, VOG6545, VOG4606, VOG3307 |
| KHMIDJOF_176 | 82401 | 109702 | False | Siphoviridae | VOG5278, VOG3307, VOG0327, VOG3519, VOG6005, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355, VOG1594, VOG6540, VOG8608 |
Phigaro v2.4.0 (Database: Jan. 2024 release)