Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| PFLHLHFN_13 | 1 | 2894 | asa1 | 0.0 | AS | Adherence | 97.69 | 74.38 | WP_010785625 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PFLHLHFN_198 | 4099 | 3614 | EF0026 | 6.05e-104 | 99.38 | 100.00 | AF454824_26 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PFLHLHFN_23 | 4301 | 5023 | rep6 | 723 / 723 | 100.00 | AJ223161 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PFLHLHFN_1 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_2 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_3 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_4 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_5 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_6 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_8 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_9 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_11 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_12 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_13 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_14 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_15 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_16 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_18 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_19 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_20 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_21 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_22 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_23 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_24 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_25 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_27 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_28 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_29 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_30 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_31 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_32 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_33 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_34 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_35 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_37 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_38 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_39 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_40 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_41 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_42 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_43 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_44 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_45 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_46 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_47 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_48 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_50 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_51 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_52 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_53 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_54 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_56 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_57 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_58 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_59 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_61 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_62 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_63 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_64 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_65 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_66 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_67 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_69 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_70 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_71 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_72 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_73 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_74 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_75 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_77 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_81 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_82 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_84 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_85 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_86 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_87 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_88 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_89 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_90 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_92 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_94 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_95 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_96 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_97 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_98 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_99 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_100 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_101 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_102 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_103 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_104 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_105 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_106 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_107 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_109 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_110 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_111 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_112 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_115 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_116 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_117 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_118 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_120 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_121 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_122 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_123 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_124 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_125 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_126 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_128 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_129 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_132 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_135 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_136 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_137 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_138 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_139 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_140 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_142 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_143 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_144 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_145 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_148 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_149 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_151 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_152 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_153 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_154 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_156 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_157 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_159 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_162 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_164 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_166 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_168 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_170 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_172 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_175 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_176 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_179 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_181 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_184 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_186 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_187 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_188 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_189 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_190 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_191 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_192 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_194 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_195 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_196 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_197 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_198 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_200 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_201 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_202 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_203 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_205 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_207 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_208 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_210 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_212 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_214 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_215 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_217 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_219 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_220 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_221 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_223 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_224 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_225 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_226 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_227 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_230 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_231 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_233 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_234 | 1.0 | 0.0 | 1.0 |
| PFLHLHFN_235 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_236 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_237 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_238 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_239 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_240 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_241 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_242 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_244 | 0.0 | 1.0 | 0.0 |
| PFLHLHFN_245 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PFLHLHFN_220 | 12449 | 39899 | False | Siphoviridae | VOG4705, VOG8608, VOG6540, VOG1594, VOG8355, VOG4659, VOG4633, VOG8263, VOG0660, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG6005, VOG3519, VOG0327, VOG3307, VOG5278 |
| PFLHLHFN_220 | 40477 | 59357 | False | Siphoviridae | VOG3307, VOG4606, VOG6545, VOG4548, VOG0322, VOG4611, VOG9708, VOG2228, VOG4552, VOG8520, VOG8520, VOG4602, VOG0371, VOG0275, VOG4010, VOG2352, VOG2090, VOG4705 |
| PFLHLHFN_220 | 89611 | 117804 | False | Myoviridae | VOG0861, VOG4705, VOG9945, VOG4397, VOG5913, VOG0173, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG5027, VOG1912, VOG7407, VOG1154, VOG4618, VOG5318, VOG0638 |
Phigaro v2.4.0 (Database: Jan. 2024 release)