Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LEKDEJHA_1 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_2 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_4 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_5 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_6 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_7 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_8 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_9 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_11 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_12 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_13 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_15 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_17 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_18 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_19 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_20 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_21 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_22 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_23 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_25 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_26 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_27 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_29 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_30 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_31 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_33 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_34 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_35 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_36 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_37 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_38 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_39 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_40 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_41 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_42 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_43 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_44 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_45 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_47 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_49 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_50 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_51 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_52 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_53 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_54 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_55 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_57 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_58 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_59 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_60 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_61 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_62 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_63 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_64 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_65 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_67 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_68 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_69 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_70 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_71 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_72 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_73 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_74 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_75 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_76 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_77 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_78 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_79 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_80 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_81 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_82 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_83 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_84 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_85 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_86 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_87 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_88 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_89 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_90 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_91 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_93 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_94 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_98 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_99 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_100 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_101 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_102 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_104 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_105 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_106 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_107 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_109 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_110 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_111 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_112 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_113 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_114 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_115 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_119 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_120 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_121 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_122 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_123 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_124 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_126 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_127 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_128 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_129 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_130 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_131 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_132 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_133 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_134 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_135 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_136 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_137 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_138 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_139 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_140 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_142 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_143 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_145 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_147 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_149 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_150 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_151 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_153 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_155 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_156 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_157 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_158 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_159 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_160 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_162 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_163 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_164 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_166 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_167 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_168 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_169 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_170 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_171 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_172 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_173 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_174 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_175 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_176 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_178 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_179 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_180 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_181 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_182 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_183 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_186 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_187 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_188 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_189 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_190 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_192 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_194 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_195 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_198 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_199 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_203 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_205 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_206 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_207 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_209 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_210 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_211 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_212 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_214 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_215 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_217 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_218 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_221 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_222 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_223 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_226 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_230 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_232 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_233 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_235 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_236 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_237 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_242 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_244 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_245 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_247 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_248 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_249 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_250 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_251 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_252 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_253 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_254 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_255 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_256 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_257 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_258 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_259 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_260 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_261 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_263 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_264 | 1.0 | 0.0 | 1.0 |
| LEKDEJHA_265 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_266 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_267 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_268 | 0.0 | 1.0 | 0.0 |
| LEKDEJHA_269 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LEKDEJHA_87 | 8779 | 15104 | False | Myoviridae | VOG0384, VOG0382, VOG0348 |
| LEKDEJHA_98 | 7590 | 20626 | False | Myoviridae | VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407, VOG1837, VOG4618, VOG5318, VOG0638, VOG8269, VOG0198, VOG9667, VOG0327 |
| LEKDEJHA_99 | 4270 | 32776 | False | Myoviridae | VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376, VOG4455, VOG0198, VOG4693 |
| LEKDEJHA_140 | 2796 | 5316 | False | Unknown | VOG4552, VOG8520, VOG8520, VOG0862 |
| LEKDEJHA_158 | 43813 | 48510 | False | Siphoviridae | VOG4603, VOG4566, VOG8288, VOG5458, VOG8288, VOG4799, VOG2228, VOG9667 |
| LEKDEJHA_257 | 5582 | 20625 | False | Myoviridae | VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198, VOG8232 |
Phigaro v2.4.0 (Database: Jan. 2024 release)