Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KMDMPCLC_1 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_2 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_3 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_4 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_5 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_7 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_8 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_9 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_11 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_12 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_13 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_14 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_15 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_17 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_18 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_19 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_20 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_21 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_22 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_23 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_25 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_27 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_29 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_30 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_31 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_32 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_33 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_34 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_35 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_36 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_37 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_38 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_39 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_40 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_42 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_43 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_44 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_45 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_46 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_47 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_48 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_49 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_51 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_52 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_53 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_54 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_55 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_57 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_58 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_59 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_61 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_62 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_63 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_64 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_65 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_67 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_68 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_69 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_70 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_71 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_72 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_73 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_74 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_75 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_76 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_77 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_78 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_80 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_81 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_82 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_83 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_84 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_85 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_86 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_87 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_88 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_89 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_90 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_91 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_92 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_93 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_94 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_95 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_96 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_97 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_98 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_99 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_100 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_101 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_102 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_103 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_104 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_105 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_106 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_107 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_108 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_109 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_110 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_111 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_112 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_113 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_114 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_115 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_116 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_118 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_119 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_120 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_121 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_123 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_124 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_125 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_127 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_128 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_130 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_131 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_132 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_133 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_134 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_135 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_137 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_138 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_139 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_141 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_143 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_144 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_145 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_147 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_148 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_149 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_151 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_153 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_154 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_155 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_156 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_157 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_159 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_160 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_161 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_163 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_165 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_167 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_170 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_174 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_177 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_180 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_182 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_186 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_187 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_189 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_190 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_191 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_193 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_194 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_196 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_198 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_199 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_200 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_202 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_203 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_207 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_208 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_211 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_212 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_214 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_217 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_218 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_220 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_221 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_222 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_223 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_224 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_226 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_227 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_231 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_233 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_235 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_236 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_237 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_239 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_240 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_241 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_242 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_243 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_245 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_246 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_249 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_251 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_253 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_255 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_256 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_260 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_261 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_262 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_263 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_264 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_265 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_267 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_268 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_269 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_270 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_271 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_272 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_273 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_274 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_275 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_276 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_277 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_278 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_279 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_280 | 1.0 | 0.0 | 1.0 |
| KMDMPCLC_281 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_283 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_285 | 0.0 | 1.0 | 0.0 |
| KMDMPCLC_286 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KMDMPCLC_93 | 13878 | 20203 | False | Myoviridae | VOG0348, VOG0382, VOG0384 |
| KMDMPCLC_111 | 7590 | 20626 | False | Myoviridae | VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407, VOG1837, VOG4618, VOG5318, VOG0638, VOG8269, VOG0198, VOG9667, VOG0327 |
| KMDMPCLC_112 | 73655 | 102161 | False | Myoviridae | VOG4693, VOG0198, VOG4455, VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691 |
| KMDMPCLC_163 | 15787 | 18307 | False | Unknown | VOG0862, VOG8520, VOG8520 |
| KMDMPCLC_187 | 8795 | 13492 | False | Myoviridae / Siphoviridae | VOG6955, VOG9667, VOG2228, VOG4799, VOG8288, VOG5458, VOG8288, VOG4566 |
| KMDMPCLC_273 | 5582 | 20625 | False | Myoviridae | VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198, VOG8232 |
Phigaro v2.4.0 (Database: Jan. 2024 release)