Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CKDPCDLH_1 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_2 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_3 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_5 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_7 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_8 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_9 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_11 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_12 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_13 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_14 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_15 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_16 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_17 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_18 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_19 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_20 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_21 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_22 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_23 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_24 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_25 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_26 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_27 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_28 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_29 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_30 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_31 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_33 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_34 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_35 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_37 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_38 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_39 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_41 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_42 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_43 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_45 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_46 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_47 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_48 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_51 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_52 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_53 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_54 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_55 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_56 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_57 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_59 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_60 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_61 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_63 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_64 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_65 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_68 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_69 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_70 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_71 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_72 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_73 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_75 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_76 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_77 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_78 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_79 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_80 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_82 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_83 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_84 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_85 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_87 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_89 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_94 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_98 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_99 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_100 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_101 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_102 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_104 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_105 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_108 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_110 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_114 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_116 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_117 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_119 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_120 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_121 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_122 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_124 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_126 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_127 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_128 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_130 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_131 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_133 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_135 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_136 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_137 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_139 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_140 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_141 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_143 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_145 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_146 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_147 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_148 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_149 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_150 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_151 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_152 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_153 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_154 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_155 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_156 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_157 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_158 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_159 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_160 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_161 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_162 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_164 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_165 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_166 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_167 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_168 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_170 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_171 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_174 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_175 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_176 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_177 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_178 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_179 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_180 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_181 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_182 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_183 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_184 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_185 | 1.0 | 0.0 | 1.0 |
| CKDPCDLH_186 | 0.0 | 1.0 | 0.0 |
| CKDPCDLH_187 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CKDPCDLH_57 | 47881 | 50149 | False | Myoviridae | VOG9667, VOG4566, VOG8288, VOG5458, VOG8288 |
| CKDPCDLH_79 | 27541 | 73988 | False | Siphoviridae | VOG6540, VOG1594, VOG8355, VOG4659, VOG4633, VOG8263, VOG0660, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG0376, VOG2545, VOG4581, VOG4841, VOG0198, VOG6005, VOG3349, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307, VOG3307, VOG4606, VOG6545, VOG4548, VOG0322, VOG4611, VOG9708, VOG2228, VOG4552, VOG8520, VOG8520, VOG4602, VOG0371, VOG0275, VOG4010, VOG2352, VOG2090, VOG4705 |
| CKDPCDLH_101 | 5716 | 33709 | False | Myoviridae | VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| CKDPCDLH_101 | 42478 | 46713 | False | Siphoviridae | VOG1250, VOG8609, VOG7236, VOG1356, VOG9667, VOG11075, VOG4602 |
| CKDPCDLH_176 | 9100 | 43067 | False | Siphoviridae | VOG4856, VOG4645, VOG4659, VOG4633, VOG4760, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG4555, VOG0686, VOG0692, VOG0691, VOG4544, VOG5532, VOG4618, VOG1422, VOG9702, VOG0198, VOG8234, VOG0189, VOG4566, VOG0283, VOG2703, VOG4552 |
Phigaro v2.4.0 (Database: Jan. 2024 release)