Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CADNBDNL_1 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_2 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_3 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_4 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_5 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_6 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_7 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_8 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_9 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_10 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_11 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_12 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_14 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_15 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_17 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_18 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_21 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_22 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_23 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_24 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_25 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_26 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_27 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_30 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_31 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_32 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_33 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_34 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_35 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_37 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_38 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_39 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_40 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_42 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_43 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_45 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_46 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_47 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_50 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_51 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_53 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_54 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_55 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_56 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_57 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_58 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_59 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_61 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_62 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_63 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_64 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_65 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_67 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_68 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_69 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_70 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_72 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_73 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_74 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_76 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_77 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_79 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_82 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_83 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_85 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_86 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_87 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_88 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_89 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_91 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_92 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_96 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_97 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_99 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_100 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_101 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_102 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_103 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_104 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_105 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_107 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_108 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_109 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_110 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_112 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_113 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_114 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_115 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_117 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_118 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_119 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_120 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_121 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_122 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_123 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_124 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_125 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_126 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_127 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_128 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_129 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_130 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_131 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_132 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_133 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_134 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_135 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_137 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_138 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_140 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_141 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_142 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_144 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_145 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_146 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_147 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_148 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_149 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_150 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_151 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_152 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_153 | 1.0 | 0.0 | 1.0 |
| CADNBDNL_154 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_156 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_158 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_160 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_161 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_163 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_165 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_166 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_167 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_168 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_169 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_170 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_171 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_172 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_173 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_174 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_176 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_177 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_178 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_181 | 0.0 | 1.0 | 0.0 |
| CADNBDNL_182 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CADNBDNL_46 | 47881 | 50149 | False | Myoviridae | VOG9667, VOG4566, VOG8288, VOG5458, VOG8288 |
| CADNBDNL_74 | 37490 | 83937 | False | Siphoviridae | VOG4705, VOG2090, VOG2352, VOG4010, VOG0275, VOG0371, VOG4602, VOG8520, VOG8520, VOG4552, VOG2228, VOG9708, VOG4611, VOG0322, VOG4548, VOG6545, VOG4606, VOG3307, VOG3307, VOG3307, VOG5278, VOG3307, VOG0327, VOG3349, VOG6005, VOG0198, VOG4841, VOG4581, VOG2545, VOG0376, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355, VOG1594 |
| CADNBDNL_97 | 5716 | 33709 | False | Myoviridae | VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376 |
| CADNBDNL_97 | 42478 | 46713 | False | Siphoviridae | VOG1250, VOG8609, VOG7236, VOG1356, VOG9667, VOG11075, VOG4602 |
| CADNBDNL_169 | 4516 | 38483 | False | Siphoviridae | VOG5353, VOG4552, VOG2703, VOG0283, VOG4566, VOG0189, VOG8234, VOG0198, VOG9702, VOG1422, VOG4618, VOG5532, VOG4544, VOG0691, VOG0692, VOG0686, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4760, VOG4633, VOG4659, VOG4645, VOG4856 |
Phigaro v2.4.0 (Database: Jan. 2024 release)