Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GDEDEPGN_1 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_2 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_3 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_4 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_5 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_6 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_7 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_8 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_9 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_10 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_11 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_12 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_13 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_14 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_15 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_16 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_17 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_18 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_19 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_20 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_23 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_24 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_25 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_26 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_27 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_29 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_30 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_31 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_32 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_33 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_34 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_35 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_36 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_37 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_38 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_39 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_40 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_41 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_42 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_43 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_44 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_45 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_46 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_47 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_48 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_49 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_50 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_51 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_52 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_53 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_54 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_55 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_56 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_57 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_58 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_59 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_61 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_62 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_63 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_64 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_65 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_66 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_67 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_68 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_69 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_70 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_71 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_72 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_73 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_74 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_78 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_88 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_96 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_102 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_103 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_106 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_109 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_111 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_112 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_115 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_116 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_117 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_119 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_120 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_122 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_123 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_124 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_125 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_127 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_128 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_130 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_132 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_134 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_135 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_137 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_139 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_140 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_142 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_145 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_146 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_147 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_148 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_149 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_150 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_151 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_152 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_153 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_154 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_156 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_157 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_158 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_160 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_161 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_163 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_164 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_167 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_168 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_169 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_170 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_171 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_172 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_173 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_176 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_177 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_178 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_179 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_180 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_181 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_182 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_183 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_184 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_185 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_187 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_188 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_189 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_190 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_191 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_192 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_193 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_194 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_195 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_196 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_197 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_198 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_199 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_200 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_201 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_204 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_205 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_206 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_207 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_208 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_210 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_211 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_212 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_213 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_214 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_215 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_216 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_217 | 1.0 | 0.0 | 1.0 |
| GDEDEPGN_218 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_219 | 0.0 | 1.0 | 0.0 |
| GDEDEPGN_220 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GDEDEPGN_11 | 4247 | 32372 | False | Myoviridae | VOG9945, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG8263, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407, VOG1154, VOG4618, VOG0638, VOG8269 |
| GDEDEPGN_45 | 18629 | 32379 | False | Myoviridae | VOG5088, VOG0189, VOG5235, VOG0348, VOG0382, VOG0384, VOG0226, VOG2880 |
| GDEDEPGN_56 | 22431 | 35818 | False | Siphoviridae | VOG3307, VOG3307, VOG5998, VOG5562, VOG1698, VOG6005, VOG0198, VOG4841, VOG1648, VOG4581, VOG1886, VOG5051, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586 |
| GDEDEPGN_67 | 4324 | 31947 | False | Myoviridae | VOG0195, VOG0796, VOG7407, VOG1912, VOG4564, VOG4824, VOG1915, VOG4364, VOG1942, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG5904, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4620, VOG10940 |
| GDEDEPGN_140 | 20278 | 47860 | False | Siphoviridae | VOG4705, VOG8608, VOG8868, VOG6474, VOG1594, VOG8355, VOG4659, VOG4633, VOG8263, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG10115, VOG4581, VOG4841, VOG0198, VOG3519, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307 |
Phigaro v2.4.0 (Database: Jan. 2024 release)