Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NDMHKNCD_1 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_2 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_3 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_4 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_5 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_6 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_7 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_8 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_9 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_12 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_13 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_14 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_15 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_16 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_17 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_19 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_20 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_21 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_22 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_24 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_25 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_26 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_27 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_28 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_29 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_30 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_31 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_32 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_34 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_35 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_36 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_37 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_38 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_39 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_40 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_41 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_43 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_44 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_45 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_46 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_47 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_48 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_49 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_50 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_52 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_53 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_54 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_55 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_56 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_57 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_59 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_60 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_61 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_62 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_64 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_65 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_66 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_67 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_68 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_69 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_70 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_71 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_72 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_73 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_74 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_75 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_76 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_80 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_88 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_95 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_98 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_99 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_102 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_105 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_110 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_111 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_112 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_116 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_117 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_119 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_120 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_121 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_122 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_124 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_125 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_126 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_127 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_129 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_130 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_131 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_132 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_133 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_135 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_136 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_137 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_138 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_140 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_141 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_144 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_146 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_147 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_148 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_150 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_151 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_152 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_154 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_155 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_157 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_158 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_160 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_162 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_163 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_164 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_165 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_166 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_167 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_168 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_169 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_170 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_171 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_172 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_173 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_174 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_175 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_176 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_178 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_179 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_181 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_182 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_183 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_184 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_187 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_188 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_189 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_190 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_191 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_193 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_194 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_195 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_197 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_199 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_200 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_201 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_202 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_203 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_204 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_205 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_206 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_207 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_208 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_209 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_210 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_211 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_212 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_214 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_215 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_216 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_217 | 0.0 | 1.0 | 0.0 |
| NDMHKNCD_218 | 1.0 | 0.0 | 1.0 |
| NDMHKNCD_219 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NDMHKNCD_13 | 4224 | 32349 | False | Myoviridae | VOG9945, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG8263, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407, VOG1154, VOG4618, VOG0638, VOG8269 |
| NDMHKNCD_49 | 18629 | 32379 | False | Myoviridae | VOG5088, VOG0189, VOG5235, VOG0348, VOG0382, VOG0384, VOG0226, VOG2880 |
| NDMHKNCD_62 | 22431 | 35818 | False | Siphoviridae | VOG3307, VOG3307, VOG5998, VOG5562, VOG1698, VOG6005, VOG0198, VOG4841, VOG1648, VOG4581, VOG1886, VOG5051, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586 |
| NDMHKNCD_72 | 4324 | 31947 | False | Myoviridae | VOG0195, VOG0796, VOG7407, VOG1912, VOG4564, VOG4824, VOG1915, VOG4364, VOG1942, VOG4710, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG5904, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4620, VOG10940 |
| NDMHKNCD_136 | 20278 | 47860 | False | Siphoviridae | VOG4705, VOG8608, VOG8868, VOG6474, VOG1594, VOG8355, VOG4659, VOG4633, VOG8263, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG10115, VOG4581, VOG4841, VOG0198, VOG3519, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307 |
Phigaro v2.4.0 (Database: Jan. 2024 release)