Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LEODDGKD_1 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_2 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_3 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_4 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_5 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_6 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_7 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_8 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_9 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_10 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_11 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_12 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_13 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_14 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_15 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_16 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_17 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_18 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_20 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_21 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_22 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_23 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_24 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_25 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_26 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_27 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_29 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_30 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_31 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_32 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_33 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_35 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_36 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_37 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_38 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_39 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_41 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_42 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_43 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_44 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_45 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_46 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_47 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_49 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_50 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_51 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_52 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_53 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_54 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_55 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_57 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_59 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_60 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_61 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_62 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_63 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_65 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_67 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_68 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_69 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_70 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_71 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_72 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_74 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_75 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_76 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_77 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_78 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_79 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_81 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_82 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_91 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_97 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_98 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_103 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_111 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_112 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_113 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_115 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_119 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_121 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_125 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_127 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_129 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_130 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_131 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_132 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_133 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_135 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_137 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_138 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_139 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_141 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_142 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_143 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_144 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_145 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_146 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_147 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_149 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_150 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_151 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_152 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_153 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_154 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_155 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_156 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_157 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_158 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_159 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_160 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_161 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_162 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_163 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_164 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_165 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_166 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_167 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_168 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_169 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_170 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_171 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_173 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_174 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_175 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_176 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_177 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_178 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_179 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_180 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_181 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_182 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_183 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_184 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_185 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_186 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_187 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_189 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_190 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_191 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_192 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_193 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_195 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_197 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_198 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_199 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_200 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_201 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_202 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_204 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_205 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_206 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_207 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_209 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_210 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_211 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_213 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_214 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_215 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_216 | 1.0 | 0.0 | 1.0 |
| LEODDGKD_217 | 0.0 | 1.0 | 0.0 |
| LEODDGKD_218 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LEODDGKD_11 | 4224 | 32349 | False | Myoviridae | VOG9945, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG8263, VOG4699, VOG1352, VOG1883, VOG1353, VOG4710, VOG1942, VOG1915, VOG4564, VOG1912, VOG7407, VOG1154, VOG4618, VOG0638, VOG8269 |
| LEODDGKD_45 | 11988 | 25738 | False | Myoviridae | VOG6085, VOG2880, VOG0226, VOG0384, VOG0382, VOG0348, VOG5235, VOG0189 |
| LEODDGKD_55 | 22431 | 35818 | False | Siphoviridae | VOG3307, VOG3307, VOG5998, VOG5562, VOG1698, VOG6005, VOG0198, VOG4841, VOG1648, VOG4581, VOG1886, VOG5051, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586 |
| LEODDGKD_68 | 10211 | 37828 | False | Myoviridae | VOG10940, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG5904, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4710, VOG1942, VOG4364, VOG1915, VOG4824, VOG4564, VOG1912, VOG7407, VOG0796 |
| LEODDGKD_144 | 20278 | 47860 | False | Siphoviridae | VOG4705, VOG8608, VOG8868, VOG6474, VOG1594, VOG8355, VOG4659, VOG4633, VOG8263, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG10115, VOG4581, VOG4841, VOG0198, VOG3519, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307 |
Phigaro v2.4.0 (Database: Jan. 2024 release)