Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MDCKOFAN_1 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_2 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_3 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_6 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_8 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_9 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_10 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_11 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_12 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_13 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_14 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_16 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_17 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_19 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_21 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_22 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_23 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_24 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_25 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_26 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_27 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_28 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_29 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_30 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_31 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_32 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_33 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_34 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_35 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_36 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_38 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_39 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_41 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_42 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_44 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_45 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_46 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_47 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_48 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_49 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_50 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_51 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_52 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_55 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_56 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_57 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_58 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_59 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_60 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_61 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_62 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_63 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_64 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_65 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_66 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_67 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_68 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_69 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_70 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_72 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_73 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_74 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_77 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_79 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_81 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_83 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_84 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_85 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_87 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_89 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_92 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_93 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_94 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_95 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_97 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_98 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_101 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_102 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_103 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_105 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_107 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_110 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_112 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_114 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_115 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_116 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_117 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_118 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_119 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_120 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_121 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_122 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_124 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_126 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_127 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_128 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_129 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_130 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_131 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_133 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_134 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_135 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_137 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_138 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_139 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_141 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_142 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_143 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_144 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_145 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_146 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_148 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_149 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_151 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_154 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_157 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_159 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_160 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_161 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_162 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_164 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_166 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_168 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_170 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_171 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_172 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_173 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_174 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_175 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_176 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_177 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_179 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_180 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_181 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_182 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_183 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_185 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_188 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_189 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_191 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_193 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_194 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_196 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_198 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_199 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_200 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_201 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_203 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_205 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_206 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_207 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_208 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_209 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_210 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_211 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_212 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_213 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_214 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_216 | 1.0 | 0.0 | 1.0 |
| MDCKOFAN_217 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_219 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_220 | 0.0 | 1.0 | 0.0 |
| MDCKOFAN_221 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MDCKOFAN_12 | 14412 | 42537 | False | Myoviridae | VOG0198, VOG8269, VOG0638, VOG4618, VOG1154, VOG7407, VOG1912, VOG4564, VOG1915, VOG1942, VOG4710, VOG1353, VOG1883, VOG1352, VOG4699, VOG8263, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4620 |
| MDCKOFAN_42 | 18629 | 32379 | False | Myoviridae | VOG5088, VOG0189, VOG5235, VOG0348, VOG0382, VOG0384, VOG0226, VOG2880 |
| MDCKOFAN_48 | 22431 | 35818 | False | Siphoviridae | VOG3307, VOG3307, VOG5998, VOG5562, VOG1698, VOG6005, VOG0198, VOG4841, VOG1648, VOG4581, VOG1886, VOG5051, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586 |
| MDCKOFAN_51 | 10211 | 37828 | False | Myoviridae | VOG10940, VOG4620, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG5904, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4710, VOG1942, VOG4364, VOG1915, VOG4824, VOG4564, VOG1912, VOG7407, VOG0796 |
| MDCKOFAN_122 | 24119 | 51701 | False | Siphoviridae | VOG3307, VOG3307, VOG5278, VOG3307, VOG0327, VOG3519, VOG0198, VOG4841, VOG4581, VOG10115, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG8263, VOG4633, VOG4659, VOG8355, VOG1594, VOG6474, VOG8868, VOG8608 |
Phigaro v2.4.0 (Database: Jan. 2024 release)