Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LGKHPJCA_1 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_2 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_4 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_5 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_6 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_7 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_8 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_9 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_10 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_11 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_12 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_13 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_14 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_15 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_16 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_17 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_18 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_19 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_21 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_22 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_23 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_24 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_25 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_26 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_27 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_28 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_29 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_30 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_31 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_32 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_33 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_34 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_35 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_36 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_38 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_39 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_41 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_42 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_44 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_45 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_46 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_47 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_48 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_50 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_51 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_52 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_53 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_54 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_55 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_56 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_57 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_58 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_59 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_60 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_61 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_63 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_64 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_65 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_66 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_67 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_68 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_69 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_70 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_71 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_72 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_73 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_74 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_75 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_76 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_77 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_78 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_79 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_80 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_81 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_82 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_83 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_84 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_85 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_86 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_87 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_90 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_97 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_98 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_104 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_107 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_109 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_111 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_114 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_118 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_119 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_121 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_123 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_124 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_125 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_126 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_128 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_129 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_130 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_134 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_135 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_136 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_138 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_139 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_140 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_141 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_143 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_144 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_146 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_147 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_148 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_150 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_151 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_152 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_153 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_154 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_155 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_157 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_158 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_160 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_161 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_162 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_163 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_165 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_167 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_168 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_169 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_170 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_172 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_173 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_174 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_176 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_177 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_179 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_180 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_181 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_182 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_186 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_187 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_188 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_189 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_190 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_192 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_193 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_194 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_196 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_197 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_198 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_199 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_200 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_202 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_203 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_205 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_206 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_207 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_208 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_210 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_211 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_212 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_213 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_214 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_216 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_217 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_218 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_219 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_220 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_221 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_222 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_223 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_225 | 0.0 | 1.0 | 0.0 |
| LGKHPJCA_226 | 1.0 | 0.0 | 1.0 |
| LGKHPJCA_227 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LGKHPJCA_98 | 65308 | 85048 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163 |
| LGKHPJCA_125 | 4916 | 29566 | False | Myoviridae | VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6307, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198, VOG8232 |
| LGKHPJCA_125 | 58720 | 60285 | False | Myoviridae | VOG8288, VOG5458, VOG8288, VOG4566 |
Phigaro v2.4.0 (Database: Jan. 2024 release)