Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EKDDOAHM_57 | 59674 | 58973 | WalR | 1.91e-108 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EKDDOAHM_25 | 1020 | 1954 | rep28 | 941 / 930 | 82.15 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EKDDOAHM_1 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_2 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_4 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_5 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_6 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_7 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_8 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_9 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_10 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_11 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_12 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_13 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_14 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_15 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_16 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_17 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_18 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_19 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_20 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_21 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_22 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_23 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_24 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_25 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_26 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_27 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_28 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_29 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_30 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_31 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_32 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_33 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_35 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_36 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_37 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_38 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_39 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_40 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_41 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_42 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_43 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_44 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_45 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_46 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_48 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_49 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_50 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_51 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_52 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_53 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_54 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_55 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_56 | 1.0 | 0.0 | 1.0 |
| EKDDOAHM_57 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_68 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_79 | 0.0 | 1.0 | 0.0 |
| EKDDOAHM_90 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)