Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFJLHEIO_206 | 58948 | 59682 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| PFJLHEIO_148 | 11165 | 13090 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PFJLHEIO_206 | 58948 | 59682 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | M15332 |
| PFJLHEIO_148 | 11165 | 13090 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| PFJLHEIO_206 | 61041 | 62275 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.49 | 84.36 | AF227520 |
| PFJLHEIO_206 | 64057 | 65271 | mef(A) | Erythromycin, Azithromycin | 96.21 | 99.75 | AJ971089 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PFJLHEIO_206 | 58951 | 59682 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_014387027.1 |
| PFJLHEIO_148 | 11168 | 13090 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| PFJLHEIO_206 | 64048 | 65271 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.77 | 100.00 | WP_063853698.1 |
| PFJLHEIO_206 | 61044 | 62303 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | PARTIALX | 95.48 | 86.04 | WP_000420317.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PFJLHEIO_1 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_2 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_3 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_4 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_5 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_6 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_7 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_8 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_9 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_10 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_11 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_12 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_13 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_14 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_15 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_16 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_17 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_18 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_19 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_20 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_21 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_22 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_23 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_24 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_25 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_26 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_27 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_28 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_29 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_30 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_31 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_32 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_33 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_34 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_35 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_36 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_37 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_38 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_39 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_40 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_41 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_42 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_43 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_44 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_45 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_46 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_47 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_48 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_49 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_50 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_51 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_52 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_53 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_54 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_55 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_56 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_57 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_58 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_59 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_60 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_61 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_62 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_63 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_64 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_65 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_66 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_67 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_68 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_69 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_70 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_71 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_72 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_73 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_74 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_75 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_76 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_77 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_78 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_79 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_80 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_81 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_82 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_83 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_84 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_85 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_86 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_87 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_88 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_89 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_90 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_91 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_92 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_93 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_94 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_95 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_96 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_97 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_98 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_99 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_100 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_101 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_102 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_103 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_104 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_105 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_106 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_107 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_108 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_109 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_110 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_111 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_112 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_113 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_114 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_115 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_116 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_117 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_118 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_119 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_120 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_121 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_122 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_123 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_124 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_125 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_126 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_127 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_128 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_129 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_130 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_131 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_132 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_133 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_134 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_135 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_137 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_138 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_140 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_141 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_142 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_143 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_144 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_145 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_146 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_147 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_148 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_149 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_150 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_151 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_152 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_153 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_154 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_155 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_156 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_157 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_158 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_159 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_160 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_161 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_163 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_164 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_165 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_166 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_167 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_168 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_169 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_170 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_171 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_172 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_173 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_174 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_175 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_176 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_177 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_178 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_179 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_180 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_181 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_182 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_183 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_184 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_185 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_186 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_187 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_188 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_189 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_190 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_191 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_192 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_193 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_194 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_195 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_196 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_197 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_198 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_199 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_200 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_201 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_202 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_203 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_204 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_205 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_206 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_207 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_208 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_209 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_210 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_211 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_212 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_213 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_214 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_215 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_216 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_217 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_218 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_219 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_220 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_221 | 0.0 | 1.0 | 0.0 |
| PFJLHEIO_222 | 1.0 | 0.0 | 1.0 |
| PFJLHEIO_223 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)