safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
3	0	0	3.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
ILFMMAJA_21	6030	6830	ErmF	ARO:3000498	ErmF	98.50	100.00	M17124.1
ILFMMAJA_42	2970	3860	CblA-1	ARO:3002999	CblA-1	96.28	100.00	GQ343019.1
ILFMMAJA_18	3	1538	tet(Q)	ARO:3000191	tet(Q)	94.11	77.93	Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
ILFMMAJA_21	6030	6830	erm(F)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	99.50	100.00	M17808
ILFMMAJA_18	216	1490	tet(Q)	Doxycycline, Tetracycline, Minocycline	100.00	66.20	Z21523

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
ILFMMAJA_21	6033	6830	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	BLASTX	98.87	100.00	WP_002682030.1
ILFMMAJA_42	2973	3860	cblA	CblA family class A beta-lactamase	BLASTX	96.28	100.00	WP_005827792.1
ILFMMAJA_18	3	1490	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	PARTIAL_CONTIG_ENDX	93.93	82.22	WP_002560998.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
ILFMMAJA_1	0.0	1.0	0.0
ILFMMAJA_2	0.0	1.0	0.0
ILFMMAJA_3	0.0	1.0	0.0
ILFMMAJA_4	0.0	1.0	0.0
ILFMMAJA_5	0.0	1.0	0.0
ILFMMAJA_6	0.0	1.0	0.0
ILFMMAJA_7	0.0	1.0	0.0
ILFMMAJA_8	0.0	1.0	0.0
ILFMMAJA_9	0.0	1.0	0.0
ILFMMAJA_10	0.0	1.0	0.0
ILFMMAJA_11	0.0	1.0	0.0
ILFMMAJA_12	0.0	1.0	0.0
ILFMMAJA_13	0.0	1.0	0.0
ILFMMAJA_14	0.0	1.0	0.0
ILFMMAJA_15	0.0	1.0	0.0
ILFMMAJA_16	0.0	1.0	0.0
ILFMMAJA_17	0.0	1.0	0.0
ILFMMAJA_18	1.0	0.0	1.0
ILFMMAJA_19	1.0	0.0	1.0
ILFMMAJA_20	0.0	1.0	0.0
ILFMMAJA_21	0.0	1.0	0.0
ILFMMAJA_22	1.0	0.0	1.0
ILFMMAJA_23	0.0	1.0	0.0
ILFMMAJA_24	1.0	0.0	1.0
ILFMMAJA_25	0.0	1.0	0.0
ILFMMAJA_26	1.0	0.0	1.0
ILFMMAJA_27	0.0	1.0	0.0
ILFMMAJA_28	1.0	0.0	1.0
ILFMMAJA_29	1.0	0.0	1.0
ILFMMAJA_30	1.0	0.0	1.0
ILFMMAJA_31	0.0	1.0	0.0
ILFMMAJA_32	0.0	1.0	0.0
ILFMMAJA_33	0.0	1.0	0.0
ILFMMAJA_34	0.0	1.0	0.0
ILFMMAJA_39	0.0	1.0	0.0
ILFMMAJA_40	0.0	1.0	0.0
ILFMMAJA_41	0.0	1.0	0.0
ILFMMAJA_42	0.0	1.0	0.0
ILFMMAJA_43	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
ILFMMAJA_1	6446	20426	False	Siphoviridae	VOG7268,
ILFMMAJA_1	25654	31947	False	Unknown	VOG8932,

Phigaro v2.4.0 (Database: Jan. 2024 release)