Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IENIFFJM_50 | 2880 | 3617 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IENIFFJM_50 | 2880 | 3617 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | U86375 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IENIFFJM_50 | 2883 | 3617 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | EXACTX | 100.00 | 100.00 | WP_001038790.1 |
| IENIFFJM_15 | 58478 | 59065 | bcrA | bacitracin resistance ABC transporter ATP-binding subunit BcrA | PARTIAL_CONTIG_ENDX | 81.12 | 63.84 | WP_002389535.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IENIFFJM_50 | 394 | 1884 | rep1 | 1491 / 1491 | 100.00 | AE016833 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IENIFFJM_1 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_2 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_3 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_4 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_5 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_6 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_7 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_8 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_9 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_10 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_11 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_12 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_13 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_14 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_15 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_16 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_17 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_18 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_19 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_20 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_21 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_22 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_23 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_24 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_25 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_26 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_27 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_28 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_29 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_30 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_31 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_32 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_33 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_34 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_35 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_36 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_37 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_38 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_39 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_40 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_41 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_42 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_43 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_44 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_45 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_46 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_47 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_48 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_49 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_50 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_51 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_52 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_53 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_55 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_56 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_57 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_58 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_59 | 1.0 | 0.0 | 1.0 |
| IENIFFJM_60 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_67 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_72 | 0.0 | 1.0 | 0.0 |
| IENIFFJM_73 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IENIFFJM_12 | 85775 | 103253 | False | Myoviridae | VOG6199, |
Phigaro v2.4.0 (Database: Jan. 2024 release)