Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IFNJLDFB_96 | 9191 | 11116 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| IFNJLDFB_8 | 64 | 888 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IFNJLDFB_8 | 64 | 888 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| IFNJLDFB_96 | 9191 | 11116 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| IFNJLDFB_8 | 1091 | 1742 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.39 | 81.40 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IFNJLDFB_8 | 64 | 885 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| IFNJLDFB_96 | 9191 | 11113 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| IFNJLDFB_8 | 1094 | 1741 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 98.61 | 81.20 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IFNJLDFB_132 | 1337 | 2016 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IFNJLDFB_1 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_2 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_3 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_4 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_5 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_6 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_7 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_8 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_9 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_10 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_11 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_12 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_13 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_14 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_15 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_16 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_17 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_18 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_19 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_20 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_21 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_22 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_23 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_24 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_25 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_26 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_27 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_28 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_29 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_30 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_35 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_46 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_48 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_49 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_50 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_51 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_52 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_53 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_54 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_55 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_56 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_57 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_58 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_59 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_60 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_61 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_62 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_63 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_64 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_65 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_66 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_67 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_68 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_69 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_70 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_71 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_72 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_73 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_74 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_75 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_76 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_77 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_78 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_79 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_80 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_81 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_82 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_83 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_84 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_85 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_86 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_87 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_88 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_89 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_90 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_91 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_92 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_93 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_94 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_95 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_96 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_97 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_98 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_99 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_100 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_101 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_102 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_103 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_104 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_105 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_106 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_107 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_108 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_109 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_110 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_111 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_112 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_113 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_114 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_116 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_117 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_118 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_119 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_120 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_121 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_122 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_123 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_124 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_125 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_126 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_128 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_129 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_130 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_131 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_132 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_133 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_134 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_135 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_136 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_137 | 1.0 | 0.0 | 1.0 |
| IFNJLDFB_138 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_139 | 0.0 | 1.0 | 0.0 |
| IFNJLDFB_140 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IFNJLDFB_1 | 454238 | 462879 | False | Unknown | VOG9345, |
| IFNJLDFB_13 | 86269 | 93506 | False | Siphoviridae | VOG0204, |
| IFNJLDFB_71 | 8879 | 23701 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)