Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PNMPDDDG_77 | 141097 | 141897 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
| PNMPDDDG_62 | 29129 | 30019 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| PNMPDDDG_14 | 176 | 1000 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PNMPDDDG_14 | 176 | 1000 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| PNMPDDDG_77 | 141097 | 141897 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PNMPDDDG_14 | 176 | 997 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| PNMPDDDG_62 | 29129 | 30016 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| PNMPDDDG_77 | 141100 | 141897 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PNMPDDDG_1 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_2 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_3 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_4 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_5 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_6 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_7 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_8 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_9 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_10 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_11 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_12 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_13 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_14 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_24 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_26 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_27 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_28 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_29 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_30 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_31 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_32 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_33 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_34 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_35 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_36 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_37 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_38 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_39 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_40 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_41 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_42 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_43 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_44 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_45 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_46 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_47 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_48 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_49 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_50 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_51 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_52 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_53 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_54 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_55 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_56 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_57 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_58 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_59 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_60 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_61 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_62 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_63 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_64 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_65 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_66 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_67 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_68 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_69 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_70 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_71 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_72 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_73 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_74 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_75 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_76 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_77 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_78 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_79 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_80 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_81 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_82 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_83 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_84 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_85 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_86 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_87 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_88 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_89 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_90 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_91 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_92 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_93 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_94 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_95 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_96 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_97 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_98 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_99 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_101 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_102 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_103 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_104 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_105 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_106 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_107 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_108 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_109 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_110 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_111 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_112 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_113 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_114 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_115 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_116 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_117 | 0.0 | 1.0 | 0.0 |
| PNMPDDDG_118 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_119 | 1.0 | 0.0 | 1.0 |
| PNMPDDDG_120 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)