Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFCAHDHG_12 | 105233 | 106438 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| MFCAHDHG_30 | 16923 | 18869 | tet(Q) | ARO:3000191 | tet(Q) | 97.81 | 98.63 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MFCAHDHG_30 | 16923 | 18835 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.75 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MFCAHDHG_12 | 106463 | 106972 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| MFCAHDHG_12 | 105233 | 106435 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| MFCAHDHG_30 | 16923 | 18836 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.96 | 99.53 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MFCAHDHG_1 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_2 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_3 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_4 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_5 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_6 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_7 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_8 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_9 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_10 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_11 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_12 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_13 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_14 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_15 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_16 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_17 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_18 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_19 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_20 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_21 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_22 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_23 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_24 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_25 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_26 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_27 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_28 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_29 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_30 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_31 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_32 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_33 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_34 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_35 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_36 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_37 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_38 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_39 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_40 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_41 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_42 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_43 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_44 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_45 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_46 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_47 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_48 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_49 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_50 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_51 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_52 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_53 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_54 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_55 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_56 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_57 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_58 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_59 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_60 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_61 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_62 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_63 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_64 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_65 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_66 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_67 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_68 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_69 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_70 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_71 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_72 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_73 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_74 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_75 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_76 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_77 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_78 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_79 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_80 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_81 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_82 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_83 | 1.0 | 0.0 | 1.0 |
| MFCAHDHG_84 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_85 | 0.0 | 1.0 | 0.0 |
| MFCAHDHG_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)