Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJFDICKD_46 | 5489 | 6694 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJFDICKD_46 | 5492 | 6694 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| BJFDICKD_46 | 4955 | 5464 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BJFDICKD_69 | 1824 | 2404 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJFDICKD_1 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_2 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_3 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_4 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_5 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_6 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_7 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_8 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_9 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_10 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_11 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_12 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_13 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_14 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_15 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_16 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_17 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_18 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_19 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_20 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_21 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_22 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_23 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_24 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_25 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_26 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_27 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_28 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_29 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_30 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_31 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_32 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_33 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_34 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_35 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_36 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_37 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_38 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_39 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_40 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_41 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_42 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_43 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_44 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_45 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_46 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_47 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_48 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_49 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_50 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_51 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_52 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_53 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_54 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_55 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_56 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_57 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_58 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_59 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_60 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_62 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_63 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_64 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_65 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_66 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_67 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_69 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_70 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_71 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_72 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_73 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_74 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_76 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_77 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_78 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_79 | 0.0 | 1.0 | 0.0 |
| BJFDICKD_81 | 1.0 | 0.0 | 1.0 |
| BJFDICKD_87 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJFDICKD_34 | 172815 | 191634 | False | Myoviridae | VOG3239, |
Phigaro v2.4.0 (Database: Jan. 2024 release)