Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JFBLEJAB_67 | 183289 | 184026 | ErmB | ARO:3000375 | ErmB | 98.37 | 98.79 | AF242872.1 |
| JFBLEJAB_2 | 7004 | 8929 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JFBLEJAB_67 | 180084 | 180950 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF864551 |
| JFBLEJAB_2 | 7004 | 8929 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | X58717 |
| JFBLEJAB_67 | 183289 | 184026 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.86 | 100.00 | U18931 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JFBLEJAB_67 | 180087 | 180950 | aadE | aminoglycoside 6-adenylyltransferase AadE | EXACTX | 100.00 | 100.00 | WP_001255868.1 |
| JFBLEJAB_2 | 7004 | 8926 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
| JFBLEJAB_67 | 183292 | 184026 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.59 | 100.00 | WP_002292226.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JFBLEJAB_1 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_2 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_3 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_4 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_5 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_6 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_7 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_8 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_9 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_10 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_11 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_12 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_13 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_14 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_15 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_16 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_17 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_18 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_19 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_20 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_21 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_22 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_23 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_24 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_25 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_26 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_27 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_28 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_29 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_30 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_31 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_32 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_33 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_34 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_35 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_36 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_37 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_38 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_39 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_40 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_41 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_42 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_43 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_44 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_45 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_46 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_47 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_48 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_49 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_50 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_51 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_52 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_54 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_55 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_56 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_57 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_58 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_59 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_60 | 1.0 | 0.0 | 1.0 |
| JFBLEJAB_61 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_62 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_67 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_77 | 0.0 | 1.0 | 0.0 |
| JFBLEJAB_78 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JFBLEJAB_38 | 8574 | 18624 | False | Unknown | VOG1093, |
| JFBLEJAB_77 | 59797 | 66451 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)