Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OLPJLJPG_68 | 2 | 1612 | tet(Q) | ARO:3000191 | tet(Q) | 95.90 | 81.74 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OLPJLJPG_68 | 1 | 1564 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.72 | 81.20 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OLPJLJPG_68 | 2 | 1564 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | PARTIAL_CONTIG_ENDX | 98.85 | 81.28 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OLPJLJPG_78 | 82986 | 81406 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OLPJLJPG_1 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_2 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_3 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_4 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_5 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_6 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_7 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_8 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_9 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_10 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_11 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_12 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_13 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_14 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_15 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_16 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_17 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_18 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_19 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_20 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_21 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_22 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_23 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_24 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_25 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_26 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_27 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_28 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_29 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_30 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_31 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_32 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_33 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_34 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_35 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_36 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_37 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_38 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_39 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_40 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_41 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_42 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_43 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_44 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_45 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_46 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_47 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_48 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_49 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_50 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_51 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_52 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_53 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_54 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_55 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_56 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_57 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_58 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_60 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_61 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_62 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_63 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_64 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_65 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_66 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_67 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_68 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_69 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_70 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_71 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_72 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_74 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_75 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_76 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_77 | 1.0 | 0.0 | 1.0 |
| OLPJLJPG_78 | 0.0 | 1.0 | 0.0 |
| OLPJLJPG_87 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)