Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGAIDGMK_3 | 182718 | 184643 | tet(Q) | ARO:3000191 | tet(Q) | 97.82 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BGAIDGMK_3 | 182718 | 184643 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.87 | 100.00 | L33696 |
| BGAIDGMK_47 | 6237 | 7033 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 91.47 | 99.50 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGAIDGMK_3 | 182721 | 184643 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.82 | 100.00 | WP_002560998.1 |
| BGAIDGMK_47 | 6237 | 7034 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 89.85 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BGAIDGMK_90 | 1990 | 2669 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BGAIDGMK_1 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_2 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_3 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_4 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_5 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_6 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_7 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_8 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_9 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_10 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_11 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_12 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_13 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_14 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_15 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_16 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_17 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_18 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_19 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_20 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_21 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_22 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_23 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_24 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_25 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_26 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_27 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_28 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_29 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_30 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_31 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_32 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_33 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_34 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_35 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_36 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_37 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_38 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_39 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_40 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_41 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_42 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_43 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_44 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_45 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_46 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_47 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_48 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_49 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_50 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_51 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_52 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_53 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_54 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_55 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_56 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_57 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_58 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_59 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_60 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_61 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_62 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_63 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_64 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_65 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_66 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_67 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_68 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_69 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_70 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_71 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_72 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_73 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_74 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_75 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_76 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_77 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_78 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_79 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_80 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_81 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_82 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_84 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_85 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_86 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_87 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_88 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_89 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_90 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_91 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_92 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_93 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_94 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_95 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_96 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_97 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_98 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_99 | 0.0 | 1.0 | 0.0 |
| BGAIDGMK_100 | 1.0 | 0.0 | 1.0 |
| BGAIDGMK_101 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BGAIDGMK_9 | 96479 | 105119 | False | Unknown | VOG9345, |
Phigaro v2.4.0 (Database: Jan. 2024 release)