Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AAABBOAE_108 | 229 | 1029 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AAABBOAE_78 | 1 | 1617 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.57 | 83.96 | Z21523 |
| AAABBOAE_108 | 229 | 1029 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AAABBOAE_108 | 232 | 1029 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AAABBOAE_10 | 137200 | 138780 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AAABBOAE_1 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_2 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_3 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_4 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_5 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_6 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_7 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_8 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_9 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_10 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_11 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_12 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_13 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_14 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_15 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_16 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_17 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_18 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_19 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_20 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_21 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_22 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_23 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_24 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_25 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_26 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_27 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_28 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_29 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_30 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_31 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_32 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_33 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_34 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_35 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_36 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_37 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_38 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_39 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_40 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_41 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_42 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_43 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_44 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_45 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_46 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_47 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_48 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_49 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_50 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_51 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_52 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_53 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_54 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_55 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_56 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_57 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_58 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_59 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_60 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_61 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_62 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_63 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_64 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_65 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_66 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_67 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_68 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_69 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_70 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_71 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_72 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_73 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_74 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_75 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_76 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_77 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_78 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_79 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_80 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_81 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_82 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_83 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_84 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_85 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_86 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_87 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_88 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_89 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_90 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_91 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_92 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_93 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_94 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_95 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_96 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_97 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_98 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_99 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_100 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_101 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_102 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_103 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_104 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_105 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_106 | 1.0 | 0.0 | 1.0 |
| AAABBOAE_107 | 0.0 | 1.0 | 0.0 |
| AAABBOAE_108 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AAABBOAE_9 | 137303 | 146437 | False | Siphoviridae | VOG0704, |
| AAABBOAE_28 | 31158 | 39278 | False | Unknown | VOG4568, |
Phigaro v2.4.0 (Database: Jan. 2024 release)