Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IMNLIBKC_7 | 1044 | 1844 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
| IMNLIBKC_127 | 389 | 1549 | tet(X) | ARO:3000205 | tet(X) | 99.48 | 99.48 | M37699.1 |
| IMNLIBKC_27 | 41 | 856 | sul2 | ARO:3000412 | sul2 | 100.00 | 100.00 | AY055428.1 |
| IMNLIBKC_7 | 17 | 841 | OXA-347 | ARO:3001777 | OXA-347 | 100.00 | 100.00 | JN086160.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IMNLIBKC_7 | 17 | 841 | blaOXA-347 | Unknown Beta-lactam | 100.00 | 100.00 | ACWG01000053 |
| IMNLIBKC_27 | 41 | 856 | sul2 | Sulfamethoxazole | 100.00 | 100.00 | AY034138 |
| IMNLIBKC_127 | 383 | 1549 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| IMNLIBKC_7 | 1044 | 1844 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IMNLIBKC_7 | 17 | 838 | blaOXA-347 | class D beta-lactamase OXA-347 | ALLELEX | 100.00 | 100.00 | WP_004295324.1 |
| IMNLIBKC_27 | 44 | 856 | sul2 | sulfonamide-resistant dihydropteroate synthase Sul2 | EXACTX | 100.00 | 100.00 | WP_001043260.1 |
| IMNLIBKC_127 | 383 | 1546 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| IMNLIBKC_7 | 1047 | 1844 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IMNLIBKC_1 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_2 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_3 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_4 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_5 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_6 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_7 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_8 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_9 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_10 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_11 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_12 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_13 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_14 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_16 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_17 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_18 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_19 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_20 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_22 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_23 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_24 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_25 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_35 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_39 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_40 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_41 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_42 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_43 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_44 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_45 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_46 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_47 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_48 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_49 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_50 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_51 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_52 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_53 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_54 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_55 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_56 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_57 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_58 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_59 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_60 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_61 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_62 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_63 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_64 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_65 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_66 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_67 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_68 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_69 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_70 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_71 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_72 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_73 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_74 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_75 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_76 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_77 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_78 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_79 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_80 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_81 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_82 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_83 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_84 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_85 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_86 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_87 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_88 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_89 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_90 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_91 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_92 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_93 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_94 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_95 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_96 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_97 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_98 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_99 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_100 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_101 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_102 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_103 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_104 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_105 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_106 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_107 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_108 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_109 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_110 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_111 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_112 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_113 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_114 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_115 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_116 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_117 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_118 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_119 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_120 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_122 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_123 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_124 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_125 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_126 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_127 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_128 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_129 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_130 | 0.0 | 1.0 | 0.0 |
| IMNLIBKC_131 | 1.0 | 0.0 | 1.0 |
| IMNLIBKC_132 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IMNLIBKC_42 | 79487 | 92554 | False | Unknown | VOG4572, |
| IMNLIBKC_56 | 113441 | 125790 | False | Unknown | VOG1198, |
| IMNLIBKC_63 | 9925 | 19473 | False | Siphoviridae | VOG9619, |
| IMNLIBKC_63 | 25860 | 32462 | False | Myoviridae | VOG1792, |
Phigaro v2.4.0 (Database: Jan. 2024 release)