Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FJLIHEEL_1 | 498746 | 498042 | WalR | 3.54e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FJLIHEEL_26 | 91605 | 91411 | CspR | 7.65e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FJLIHEEL_26 | 91605 | 91408 | CspA | 1.17e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FJLIHEEL_9 | 4473 | 5375 | rep38 | 903 / 903 | 99.00 | CP005943 |
| FJLIHEEL_10 | 1871 | 2800 | rep28 | 930 / 930 | 98.17 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FJLIHEEL_1 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_2 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_3 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_4 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_5 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_6 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_7 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_8 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_9 | 1.0 | 0.0 | 1.0 |
| FJLIHEEL_10 | 1.0 | 0.0 | 1.0 |
| FJLIHEEL_11 | 1.0 | 0.0 | 1.0 |
| FJLIHEEL_12 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_13 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_14 | 1.0 | 0.0 | 1.0 |
| FJLIHEEL_15 | 1.0 | 0.0 | 1.0 |
| FJLIHEEL_17 | 1.0 | 0.0 | 1.0 |
| FJLIHEEL_23 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_24 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_25 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_26 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_27 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_28 | 0.0 | 1.0 | 0.0 |
| FJLIHEEL_29 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FJLIHEEL_1 | 500505 | 510575 | False | Siphoviridae | VOG0204, VOG4553, VOG4556, VOG4544, VOG4581, VOG4841, VOG0205, VOG6414, VOG4609 |
| FJLIHEEL_12 | 362897 | 386854 | False | Siphoviridae | VOG3443, VOG1191, VOG8294, VOG0602, VOG9888, VOG8917, VOG9997, VOG3498, VOG4619, VOG0801, VOG6163, VOG0541, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG6154 |
| FJLIHEEL_12 | 390333 | 402913 | False | Siphoviridae | VOG0044, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG8925, VOG0181, VOG8222, VOG1563, VOG8520, VOG4602, VOG9326 |
| FJLIHEEL_25 | 92738 | 118212 | False | Siphoviridae | VOG9998, VOG8870, VOG10957, VOG4599, VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG8239, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG7810, VOG0741, VOG4841, VOG0198, VOG6005 |
Phigaro v2.4.0 (Database: Jan. 2024 release)