Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ACNOMMIH_65 | 2999 | 6562 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 92.48 | 100.08 | NC_008618.1 |
| ACNOMMIH_33 | 1401 | 3320 | tet(W) | ARO:3000194 | tet(W) | 100.00 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ACNOMMIH_33 | 1401 | 3320 | tet(W) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | AJ427422 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ACNOMMIH_33 | 1401 | 3317 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_002586627.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ACNOMMIH_1 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_2 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_3 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_4 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_5 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_6 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_7 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_8 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_9 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_10 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_11 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_12 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_13 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_14 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_15 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_16 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_17 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_19 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_20 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_21 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_22 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_23 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_24 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_25 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_26 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_27 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_28 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_29 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_30 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_31 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_32 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_33 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_34 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_35 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_36 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_37 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_38 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_39 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_40 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_41 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_42 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_43 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_44 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_45 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_46 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_47 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_48 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_49 | 1.0 | 0.0 | 1.0 |
| ACNOMMIH_50 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_51 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_52 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_53 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_54 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_55 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_56 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_57 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_58 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_59 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_60 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_61 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_62 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_63 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_64 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_65 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_66 | 0.0 | 1.0 | 0.0 |
| ACNOMMIH_67 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ACNOMMIH_16 | 5187 | 30716 | False | Siphoviridae | VOG9502, VOG6357, VOG6495, VOG4841, VOG6459, VOG1574, VOG5101, VOG0720, VOG2806, VOG4555, VOG3434, VOG1887, VOG1581, VOG4557, VOG4545 |
Phigaro v2.4.0 (Database: Jan. 2024 release)