Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EOOCDIKL_1 | 0.0 | 1.0 | 0.0 |
| EOOCDIKL_2 | 0.0 | 1.0 | 0.0 |
| EOOCDIKL_3 | 0.0 | 1.0 | 0.0 |
| EOOCDIKL_4 | 0.0 | 1.0 | 0.0 |
| EOOCDIKL_5 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_6 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_7 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_8 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_9 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_10 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_11 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_12 | 1.0 | 0.0 | 1.0 |
| EOOCDIKL_13 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EOOCDIKL_1 | 9350 | 25805 | False | Myoviridae | VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295 |
| EOOCDIKL_1 | 1184472 | 1214612 | False | Siphoviridae | VOG0703, VOG1637, VOG4705, VOG4334, VOG4856, VOG4856, VOG10972, VOG4619, VOG0801, VOG5793, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544, VOG3699, VOG0198, VOG4566, VOG0226, VOG0186, VOG1309, VOG3941, VOG4552, VOG5353, VOG8520, VOG0862 |
Phigaro v2.4.0 (Database: Jan. 2024 release)