Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFBODDGH_3 | 57847 | 61407 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 98.48 | 100.00 | NC_008618.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BFBODDGH_1 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_2 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_3 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_5 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_6 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_7 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_9 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_10 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_11 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_12 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_13 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_14 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_15 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_16 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_17 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_18 | 1.0 | 0.0 | 1.0 |
| BFBODDGH_19 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_20 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_21 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_22 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_23 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_24 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_25 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_26 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_27 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_28 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_29 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_30 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_31 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_32 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_33 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_34 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_35 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_36 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_37 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_38 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_39 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_40 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_41 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_42 | 0.0 | 1.0 | 0.0 |
| BFBODDGH_43 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BFBODDGH_10 | 145446 | 157729 | False | Siphoviridae | VOG1241, VOG2538, VOG4564, VOG0686, VOG2038, VOG9852, VOG2560, VOG5101, VOG0720, VOG4576, VOG4553 |
| BFBODDGH_43 | 96441 | 108736 | False | Siphoviridae | VOG4194, VOG9570, VOG9569, VOG5793, VOG5588, VOG5589, VOG5587, VOG4568, VOG4556, VOG4544 |
Phigaro v2.4.0 (Database: Jan. 2024 release)