Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MBFFGIDB_22 | 142454 | 143158 | WalR | 1.27e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MBFFGIDB_15 | 33871 | 33674 | CspR | 6.81e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MBFFGIDB_56 | 1396 | 2454 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MBFFGIDB_1 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_2 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_3 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_4 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_5 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_6 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_7 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_8 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_9 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_10 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_11 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_12 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_13 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_14 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_15 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_16 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_17 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_18 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_19 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_20 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_21 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_22 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_23 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_24 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_25 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_26 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_27 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_28 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_29 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_30 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_31 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_32 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_33 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_34 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_35 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_36 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_37 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_38 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_39 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_40 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_41 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_42 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_43 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_44 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_45 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_46 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_47 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_48 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_49 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_50 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_51 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_52 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_53 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_54 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_55 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_56 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_57 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_58 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_59 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_60 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_61 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_63 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_64 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_65 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_66 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_67 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_68 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_69 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_70 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_71 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_72 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_73 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_74 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_75 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_76 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_77 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_78 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_79 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_80 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_81 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_82 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_83 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_84 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_85 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_86 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_87 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_88 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_89 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_90 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_91 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_92 | 0.0 | 1.0 | 0.0 |
| MBFFGIDB_94 | 1.0 | 0.0 | 1.0 |
| MBFFGIDB_95 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MBFFGIDB_11 | 174109 | 183182 | False | Siphoviridae | VOG4632, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556 |
| MBFFGIDB_15 | 4358 | 14172 | False | Unknown | VOG0189, VOG4566, VOG0186, VOG1309, VOG8241, VOG7236, VOG6495, VOG11003, VOG11003, VOG6179, VOG4965, VOG1333, VOG6495 |
| MBFFGIDB_77 | 418 | 23450 | False | Siphoviridae | VOG3699, VOG4544, VOG0720, VOG4564, VOG5616, VOG1300, VOG4555, VOG3434, VOG1887, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG4705, VOG1637, VOG0703, VOG4918, VOG4605 |
Phigaro v2.4.0 (Database: Jan. 2024 release)