Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PMOJHLOK_86 | 28802 | 28098 | WalR | 6.80e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| PMOJHLOK_55 | 6263 | 6066 | CspR | 4.16e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PMOJHLOK_1 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_2 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_3 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_4 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_5 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_6 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_7 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_8 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_9 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_10 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_11 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_12 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_13 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_14 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_15 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_16 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_17 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_18 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_19 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_20 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_21 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_22 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_23 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_24 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_25 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_26 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_27 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_28 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_29 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_30 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_31 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_32 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_33 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_34 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_35 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_36 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_37 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_38 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_39 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_40 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_41 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_42 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_43 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_44 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_45 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_46 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_47 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_48 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_49 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_50 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_51 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_52 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_53 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_54 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_55 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_56 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_57 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_58 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_59 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_60 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_61 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_62 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_63 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_64 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_65 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_66 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_67 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_68 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_69 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_70 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_71 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_72 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_73 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_74 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_75 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_76 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_77 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_78 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_79 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_80 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_81 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_82 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_83 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_84 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_85 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_86 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_87 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_88 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_89 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_90 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_91 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_92 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_93 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_94 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_95 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_96 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_97 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_98 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_99 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_100 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_101 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_102 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_103 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_104 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_105 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_106 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_107 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_108 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_109 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_110 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_111 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_112 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_114 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_115 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_116 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_117 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_118 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_119 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_120 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_121 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_122 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_123 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_124 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_125 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_126 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_127 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_128 | 0.0 | 1.0 | 0.0 |
| PMOJHLOK_129 | 1.0 | 0.0 | 1.0 |
| PMOJHLOK_130 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PMOJHLOK_56 | 1362 | 28796 | False | Siphoviridae | VOG0536, VOG9741, VOG9741, VOG0152, VOG4994, VOG3643, VOG6386, VOG0044, VOG2338, VOG0198, VOG4570, VOG3699, VOG4544, VOG0691, VOG0692, VOG5616, VOG1183, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG5587, VOG5601, VOG9763, VOG0701, VOG4705, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637 |
Phigaro v2.4.0 (Database: Jan. 2024 release)